Cmes009333.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cybosia mesomella
Gene Symbol
-
Assembly
GCA_946251875.1
Location
CAMIUH010000266.1:1709494-1717970[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0065 1.3 11.5 1.1 3 23 736 757 735 757 0.96
2 23 0.24 49 6.6 0.3 1 22 1138 1159 1138 1159 0.95
3 23 7.7 1.5e+03 1.9 0.2 1 22 1201 1222 1201 1224 0.82
4 23 0.0025 0.5 12.9 2.1 3 22 1235 1254 1235 1254 0.96
5 23 0.98 1.9e+02 4.7 0.0 3 23 1263 1284 1261 1284 0.89
6 23 0.007 1.4 11.4 0.1 3 23 1304 1325 1302 1325 0.96
7 23 0.0022 0.44 13.0 2.5 1 23 1331 1354 1331 1354 0.95
8 23 0.15 29 7.3 0.0 1 23 1381 1404 1381 1404 0.90
9 23 0.0064 1.3 11.6 3.5 1 23 1409 1431 1409 1431 0.97
10 23 0.096 19 7.9 0.2 1 23 1437 1460 1437 1460 0.95
11 23 0.0027 0.54 12.7 1.3 1 23 1473 1495 1473 1495 0.97
12 23 0.00021 0.041 16.3 1.8 1 23 1551 1574 1551 1574 0.97
13 23 0.0099 2 11.0 1.1 1 23 1635 1658 1635 1658 0.96
14 23 0.0028 0.55 12.7 2.1 2 23 1685 1707 1684 1707 0.95
15 23 0.1 20 7.8 0.1 2 23 1713 1735 1712 1735 0.93
16 23 0.012 2.3 10.8 0.2 1 21 1779 1799 1779 1800 0.95
17 23 0.00049 0.098 15.1 1.0 1 23 1810 1832 1810 1832 0.93
18 23 0.00013 0.026 16.9 0.3 2 23 1922 1944 1922 1944 0.93
19 23 4.6e-07 9.2e-05 24.6 1.4 3 23 1951 1971 1950 1971 0.98
20 23 0.03 6 9.5 1.3 1 23 1990 2012 1990 2013 0.94
21 23 0.14 28 7.3 0.0 1 23 2039 2061 2039 2061 0.97
22 23 0.032 6.4 9.4 0.6 1 23 2067 2090 2067 2090 0.95
23 23 0.0003 0.059 15.8 0.4 1 23 2098 2121 2098 2121 0.96

Sequence Information

Coding Sequence
ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGCGTGGCTGTAGAGATAAGTGAAAATGATGAGCTTCCCAAGAATGTCTGCAGGAAATGCATGGACAATGTCAATAATTggcatatatttaaaaatgtttgtgaAAGGACTCAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTGCAAATAAAGAGTGAACCATTGTCTGATGAAGCTTATGATGATGGAGTTGTTATTGAAGGCTCATATCCTGATAGTGAGaATGCCACTCTGGCAAATAAAGTTCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGGAGTGATAAGAAGTATGTGGATCCTCGAATGGATTGGCATCGAGTCTATGCCATCTTGGACTTGGTTAAAGACAATGAGGTGATTGACTCTCTTCAGACAAAGGAAGAGTGTGATGTTTTGCAACACTCAGATCATGATTCTGATACTGAGGCTGAACTTCAACCAGACATTGAAGATGATTATGTAGATTGCAAAAATGGCTATGTctgcaaaaataataaagtcCTGTCAAAAAATCCCAAAGTCTCACCATCAACGAACAACTTAAAAATTCGACAAGCTCAGCAACTTAGAAAACGAAAATTAGACATTCCCAAACAACACTGCCCGCAACCTAAAAATGCTTGGCAGTTAATATTCACGGATGACTTACTGGAATTGATTGTCACCTCCACCAATGATAATATTGTCAGGAATGGAAAAAGTAATTCTATTGCGACTACTGTCAGCGAAATAAAAACGCTTATCGGCATTTTGTATTTGCACGGAATAATGCGGCCGACGCATGAAAAATGCACTGACCTTTGGCGTGGCGAATGTGGTGTACCTTGCATTAGAAGTTCCATGAAATATGAAAGGTTTAAATTCCTACTACAACATTTGAGTTTTGACAAAGAAGACGACGATAGCATTATACAATTTGATATCATGAAACGTATGCGTAAGGTATTCGAAATCTTCGCGATGAATTGCAGAACAGCTCACGAGATTGGGAATATTGCAGTTATTGATGAGATCATTGTGCCAGTTTATGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCATTAAAACGCGGTATAAAAATGGTACTGCTTGTAGACTCATCTACATTCTATATGAGCAATTTAGACGTCATTACTGACCCATATTTTGGTGCTGAAGAAATAACCAAAAAGTTAGTTCAGCATTTAGCGGGTACGGGTAGAACTATTGTTATGGATAGTTGGTACACCTCTTCATCACTGATAGAACACCTTAGAAATGAATATCAGTTATTCACTATAGCAGCATTACATCCACACAATGCCTGGATTCCACCATTGTTTCTTTCTCAGTATAGAAAGTGCAGAACATTCATGTCTGGATTTATTGATGATGATGTTTCACTTACATCTTATGTGAACTCAGACATAAAGGCGATAAATATAATGACTAATGAGCCTAGATTTTATAGGAAAGGTCATGTCAATCAAACTACAGTTGTTTCTGTGTATAAGAAGAATCAGTCAGCTGTGGAAGTAGTTGATGTTATTATGAATTATTATACCACAATGCAACATACGAATGACTGGACACTGTCATTATTCTTTACATTATTAAATATTGCTTCTGTCAATGCCCAGGTTTTATGGAGTGCCCAAAATACAAATGTTGCACAACGTAGAACTTTTATTAAAGAGCTGGCAATAAGTTTATTGGTGCCTGAAGAGAGAATATCTATATCACCAATTAAGTTAGATGAGATATGTGAAAGAAGGCAAAACCTATCCCTATTGCGTGAAATACAACCATATTACAAGAACAGGAGGAGGTGTAAAATATGTGTGAAGACAACTAAACGGGACCGTAGAACCAAACAGTTTTGTGGAGTGGAGAGTGAGAAAGAtgaagaagaggaagaagatGAAGAGATGAATGAACGTACTCAATCGTTCCCTAAAATGCCCAATATGCCAGAAGTGTCTATAACAGTAATGCGGCCAACGGGTGAAACGCTGCACGCCCGACAAGGTATTCACCAGCTCGCTTCTAAAGACTGCCTAGTCTGCGGCCGCACCTACAGATACTCCCATAATGCCCGTCGACATGAACTTACAGCTCACAGCTTTGACCGGTACACAAACAAAATAACGCCTAAAAAAGCACACAGTCATCATCTCCAACCCAAACTGAGACCAAATCCTTTCAACCCTAAATCACGGTTGATGCCCAATCCTATTAGTCATAAAATGCAATTTATGTCGAAAAACATCCCAACAAAAGTAGTGCCCATTAATAAAGTTATCACGCCACAGAAGCCCATACCGATTAAAGCGGCGAAAGCGCCACAAAATAATCTACCTTATCCTCTTCGTATTAAAGCACTTAAAGAtttacaaataaagaaaaaggagcctcaaattttaaaaacattgttGACATCTAAACCTGAGGTTCTAGTGTCGGAACCCGAAATTATAAATTCTGGACCAGAAAGTCCAGAGACACTAATATCTGAACCTGAAATTGCTTCTTTCCAAGTAGAAGCGATACTTTCTGAGCCTGATGCCGACGTCTATGATCAACAGCAGGGTGAAGAGGAAGTTGACGCAGATATGAATAACCAAGGTCAAAACTATGATACCGTTGATATGAATTCGGAAAATGAAATTGAGATCGCTCGACAACAGGGTGATGAGATTGAAGGCGAAGAACAGGTTGATGGTGATGAAAACATGGATCAAGACGATAATAATATGGATGGTGGTCAGAGTGACAACGATCAAGATGTCATTGATGATACAGTAGACAGTCAAGAGAATATGGAAATAGCAGATGGTCTCGAAATCAAAGCAGAAAATGAGCTGAAGGAAGCTGAGGATGGTCTTGAGGAAAGAGAGCAGGAGGAACTTGAAATGAACCACACCATGAATGACGATGACGACGATGATTTACCAATCTCAATACAACCAGTTGTTGAAATTAATGAAGATTTGCAGGTTAACTCATTTAATACTGAGATAGGCGAGGATGATGAACATGACGAGACTGTTGATCCTAACGAGGCGGTTGACGAAGAGGAGGTCAAGGAACTTGATCCTGACAAAACTTATGTCACAAAGACACAACGAGATTTCATTTTAAAGTATCGCGATGTTATTCAACAAATCAATACTAAACGTTGTTTGTGCTGTGACAGAGAACATCCACGCAGAAAAGCGGTTATTCAGCACTTGCAGAAAAATGGACAAAAGGTACCTAAACATACCTGTTATAATTGTGTAATTACATTCGGGCATATCGGTGCTCTACTCAGCCATATGAGGTCAAACTCTTGTACTGATTTATGGAAGATTATATATAACGAAAATGGCATTACTGATGACTTGGTTCTGGAGGACGAGCCTAAGGAGGTCAAGGTTCAGTATAAAGATATATTTAATGCTAGGTCCTATGCTTGTAAACTCTGTCCTGCAAAATTCCAATTGAAGCAGTTTATAATGAAACATGTTTTGGATGCTCATGAAGATGGGCAGTCTAGGGTGCCGCTAGGTTGTGTCCATTGTCGAGCACGGTTTAAGGACAAGAGTTTGCTTAAGAAGCATATTCGTAAAGGTGACTGTACAGTTTATGTAGCGTGCGACTTATGTCCGGAAACGTTCGGAAATATGCAGACTTTCAACGACCACGCGTTAGCTATTCATGCTGGTAATTTCGAGTCGGATAGTCAGAGCAAATGTGTCGACGGTCGCCCTACTGACTGTCCAATATGTGGAAAGAAAAATAGCAGCTATCCGAATTTAGTAAAACATTTGAAAATTATACACAATGAAGAAAAACCTCACTACTGTCAACATTGCGATTCTAAATTCGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAGCATTCTGACAGGACTTTGGGCATGAATTTAAACAATGAGCCGGATATGTCCATTGTGAAGGAAGAGGCGGAAGAGTACCATTATTCTTGTACTGAATGTAACGCCATATTCGAGACTGTTGACGCGTGGACAGACCACCAGGTGGCCGAACACAATCAAGTGGCGCATCACTGCGACCAATGCGACAAGAAATTTTTACGTCCTTCTGAGCTTGCCGAGCACAAGAACACTCATTTGAGGGTTAAGTTCTATCCGTGCAGCGTTTGTGCCAACTCTTACAGTACTCCTCAAAAACTGTCTGAACATGTACAACAGTCCCATCCCGGAATCGGCGCAATCGCTGCAGCAGATACGGAATTCTTTTGCGATATCTGTATCAGATCATTCAAAAGCCGTCAAGCATATTCAAACCATATGCGCATACATGCTAAAGTACCTACTACCAATAGAAAACCAGGAGATCTCACTCCTACTTCTTCTAATAAAGGGTTTTCACCCTCAATTATAGGCAAACCCATTAAACATGTATACCCAATGGTTCAACCCGGTTTTGTCTCATTCAAACCTCATTACAATATTCCTAATGCACCCTATTCATGTGACATTTGTGGTAAAGGATTTAtgcataaaaagaatatatggaAACACAAAAAAGTTTTGCACGCTGATATACTAAACGAAAGAAACGATAGTGAGGAGAATACTATGCAAGCTTCCACCGAAGAAGATGAATTTAATCTAGATGAAAATGGCACTATTCTCTCCACGCCCCAATTTAATAGTTTCAACTTTGGCAACTTTGCGAACAATGCCCAACAAACACAACAACAAGATCCAATGCCGTATTCATGTGAACTATGTCTCAAACGGTTTCCACTAAGAACTAGTTTGTGGAAACATAAACGCGCTAAACATGGCATTGTAAATCCTAATTCCAGCGGCGGCAATGATACGCAGACGCCAGCGGCAAGTGGCGAAGGAAGTAGTAGATCTAGTTGTACAATATGTAGAATTACTTTTTCAGATAAGAAATCTTATTATCGTCATCGAAAAAATGTTCACAAGTCCACTGTACAAATGTGCAAAATTTGTGGCAAACCTCTTAACTCGACTTTGGAATTGTATGAGCATTTGAAAGCTGCCCACGCCAGAGAACTTTTAGGTTACAACGCTAATCAAGGTTCCAGTAAATCGCTTGAAGTAGCACAAGAGATAGAACCGGATTATGATAATGACCAGGAATCTGTGGATCCCAGTGTTGATTATCAAGCACGCTACCCTTGCGACACATGTGGCAAACAATTTGTCGGTTTGTTAGCGTTACAGAACCATCAGTGTATAAATCAGGGCCCATCACAACCACAAACATTCGACTGTGAAATCTGCCACAAGAGTTATACCTCAATATCGGCTCTAAAAAGCCACCGTGGATGGCACTTACGGTCACCGGATGGAAAAGCAGCTGCTAATAATAGCGGACTTTGGATGCCTCAACATAAAGTCACGAGCAAAATAAGTAAACATGAAGTTATTGATCCAGTGCAGCTTGCTAAAGTTACGCACTCAAGTCCTGCCGCTGCAGTAGCGGCTAAGAGAAGACTTCCGCCTGAGGTTGAAGTCACCGTTGTTAATCCGAATAAGAAAATGCGGTCTGATGATTCCGTTGAATTAGAACAGCATAATTCTTGTTCAGCTGAAGATAGGTACTGTACGATTTGTGATAAAGAGTTTACTAAACGGGCAGCTTATCAGCGCCACATGGATGAGGTGCACCAACCGAACTCTGTGTTCTGTCCAGTTTGTGATAAGAGTTTCACTAGAAAGTCAACGCTACTTATCCACATGAAGAAGCACTATGAGAGTGGTGAAGGTAGTTCGAGCATGGTTGGTCAAGTTGAAGACGAGTTGCACACGTGTGACTTATGTGGAGCCCAATACGATGATGAACAATCGCTGACAGCGCATCGAGTGAGGCATCACGGCGAGGAGTCGGAAGAGGATGACGATGAAGATGATGGAGAAGATGGCAATGTACCTATTGCGCCTCCAGGTGAGTTCACGTGTGGACAATGTGGTGATGGCGTAGCTACACCTCGGGATTTAATCGCTCACCGCACAATGCATGCTACTCCCACTAAATTCTTCTGTAACATTTGCAAAGTATACTTTGCAAGAGCGTTGGACCTTTCGTCCCACACCAGGGCTAGACACGCAGACAATGAAAAGGTCTTTTTTCCTTGTGCAATGTGCGATAGATTCTACATGAACAAGAAGAGTTTGCAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence
MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVAVEISENDELPKNVCRKCMDNVNNWHIFKNVCERTQNKLQSLISKDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDSENATLANKVQPEGPPILASLGLTPRSDKKYVDPRMDWHRVYAILDLVKDNEVIDSLQTKEECDVLQHSDHDSDTEAELQPDIEDDYVDCKNGYVCKNNKVLSKNPKVSPSTNNLKIRQAQQLRKRKLDIPKQHCPQPKNAWQLIFTDDLLELIVTSTNDNIVRNGKSNSIATTVSEIKTLIGILYLHGIMRPTHEKCTDLWRGECGVPCIRSSMKYERFKFLLQHLSFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTAHEIGNIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVQHLAGTGRTIVMDSWYTSSSLIEHLRNEYQLFTIAALHPHNAWIPPLFLSQYRKCRTFMSGFIDDDVSLTSYVNSDIKAINIMTNEPRFYRKGHVNQTTVVSVYKKNQSAVEVVDVIMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWSAQNTNVAQRRTFIKELAISLLVPEERISISPIKLDEICERRQNLSLLREIQPYYKNRRRCKICVKTTKRDRRTKQFCGVESEKDEEEEEDEEMNERTQSFPKMPNMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKAHSHHLQPKLRPNPFNPKSRLMPNPISHKMQFMSKNIPTKVVPINKVITPQKPIPIKAAKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADVYDQQQGEEEVDADMNNQGQNYDTVDMNSENEIEIARQQGDEIEGEEQVDGDENMDQDDNNMDGGQSDNDQDVIDDTVDSQENMEIADGLEIKAENELKEAEDGLEEREQEELEMNHTMNDDDDDDLPISIQPVVEINEDLQVNSFNTEIGEDDEHDETVDPNEAVDEEEVKELDPDKTYVTKTQRDFILKYRDVIQQINTKRCLCCDREHPRRKAVIQHLQKNGQKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPETFGNMQTFNDHALAIHAGNFESDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMNLNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQSHPGIGAIAAADTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDLTPTSSNKGFSPSIIGKPIKHVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNLDENGTILSTPQFNSFNFGNFANNAQQTQQQDPMPYSCELCLKRFPLRTSLWKHKRAKHGIVNPNSSGGNDTQTPAASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSLEVAQEIEPDYDNDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQGPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQHNSCSAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSMVGQVEDELHTCDLCGAQYDDEQSLTAHRVRHHGEESEEDDDEDDGEDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01075719;
90% Identity
iTF_01166937;
80% Identity
-