Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829102.1:6160914-6169636[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0064 0.48 11.6 1.1 3 23 620 641 619 641 0.96

2 23 0.24 18 6.7 0.3 1 22 1023 1044 1023 1044 0.95

3 23 7.6 5.6e+02 2.0 0.2 1 22 1086 1107 1086 1109 0.82

4 23 0.0024 0.18 12.9 2.1 3 22 1120 1139 1120 1139 0.96

5 23 0.24 18 6.7 0.0 3 23 1148 1169 1146 1169 0.90

6 23 0.0069 0.51 11.5 0.1 3 23 1189 1210 1187 1210 0.96

7 23 0.0022 0.16 13.1 2.5 1 23 1216 1239 1216 1239 0.95

8 23 0.14 11 7.4 0.0 1 23 1266 1289 1266 1289 0.90

9 23 0.0063 0.47 11.6 3.5 1 23 1294 1316 1294 1316 0.97

10 23 0.094 7 8.0 0.2 1 23 1322 1345 1322 1345 0.95

11 23 0.0027 0.2 12.8 1.3 1 23 1358 1380 1358 1380 0.97

12 23 0.0002 0.015 16.3 1.8 1 23 1436 1459 1436 1459 0.97

13 23 0.0097 0.72 11.1 1.1 1 23 1519 1542 1519 1542 0.96

14 23 0.0027 0.2 12.8 2.1 2 23 1569 1591 1568 1591 0.95

15 23 0.1 7.4 7.9 0.1 2 23 1597 1619 1596 1619 0.93

16 23 0.011 0.85 10.8 0.2 1 21 1663 1683 1663 1684 0.95

17 23 0.00048 0.036 15.2 1.0 1 23 1694 1716 1694 1716 0.93

18 23 0.00013 0.0096 17.0 0.3 2 23 1807 1829 1807 1829 0.93

19 23 4.5e-07 3.4e-05 24.7 1.4 3 23 1836 1856 1835 1856 0.98

20 23 0.023 1.7 9.9 2.1 1 23 1877 1899 1877 1900 0.95

21 23 0.14 10 7.4 0.0 1 23 1926 1948 1926 1948 0.97

22 23 0.032 2.3 9.4 0.6 1 23 1954 1977 1954 1977 0.95

23 23 0.00029 0.022 15.8 0.4 1 23 1985 2008 1985 2008 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0064	0.48	11.6	1.1	3	23	620	641	619	641	0.96
2	23	0.24	18	6.7	0.3	1	22	1023	1044	1023	1044	0.95
3	23	7.6	5.6e+02	2.0	0.2	1	22	1086	1107	1086	1109	0.82
4	23	0.0024	0.18	12.9	2.1	3	22	1120	1139	1120	1139	0.96
5	23	0.24	18	6.7	0.0	3	23	1148	1169	1146	1169	0.90
6	23	0.0069	0.51	11.5	0.1	3	23	1189	1210	1187	1210	0.96
7	23	0.0022	0.16	13.1	2.5	1	23	1216	1239	1216	1239	0.95
8	23	0.14	11	7.4	0.0	1	23	1266	1289	1266	1289	0.90
9	23	0.0063	0.47	11.6	3.5	1	23	1294	1316	1294	1316	0.97
10	23	0.094	7	8.0	0.2	1	23	1322	1345	1322	1345	0.95
11	23	0.0027	0.2	12.8	1.3	1	23	1358	1380	1358	1380	0.97
12	23	0.0002	0.015	16.3	1.8	1	23	1436	1459	1436	1459	0.97
13	23	0.0097	0.72	11.1	1.1	1	23	1519	1542	1519	1542	0.96
14	23	0.0027	0.2	12.8	2.1	2	23	1569	1591	1568	1591	0.95
15	23	0.1	7.4	7.9	0.1	2	23	1597	1619	1596	1619	0.93
16	23	0.011	0.85	10.8	0.2	1	21	1663	1683	1663	1684	0.95
17	23	0.00048	0.036	15.2	1.0	1	23	1694	1716	1694	1716	0.93
18	23	0.00013	0.0096	17.0	0.3	2	23	1807	1829	1807	1829	0.93
19	23	4.5e-07	3.4e-05	24.7	1.4	3	23	1836	1856	1835	1856	0.98
20	23	0.023	1.7	9.9	2.1	1	23	1877	1899	1877	1900	0.95
21	23	0.14	10	7.4	0.0	1	23	1926	1948	1926	1948	0.97
22	23	0.032	2.3	9.4	0.6	1	23	1954	1977	1954	1977	0.95
23	23	0.00029	0.022	15.8	0.4	1	23	1985	2008	1985	2008	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGCGTGTCTGTAGAGATAAGTGAAAATGATGAGCTGCCCACGAATGTCTGCAGAAAATGCATGGATAATGTCAATAATTggcatatatttaaaaatgtatgtgaaAGGACTCAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTACAAATTAAGAGTGAACCATTGTCTGATGAAGCTTATGATGATGGAGTTGTTATTGAAGGCTCATATCCTGATAGTGAGAATGCCACTCTGGCGAATAAAGTTCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGACTCACACCCAGGAGTGATAAGAAGTATGTGGATCCTCGAATGGATTGGCATCGAGTCTATGCCATCTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTACAGTCAAAGGAAGAGTGTGATGTTTTGCAACACTCTGATCATGATTCTGATACTGAGGCTGAACTTCTACCAGGCATTGAAGATGACTATGTTGATAGCAAAAATGGCTACATCtgcaaaaataagaaaataatatcaaaaaatcCTAAACTCTCAACTTCAATGAATAACTTGAAAATTCGAGAAGCTCAGCAACTGAGAAAACAAAAATTGGACATAGCTAAACATCACTGTCCACAACCTAAAAATGCTTGGCAGTTAATATTCACAGATGACTTATTGGAATTGATTGTGTCCTCTACCAATGACAATATTGTCAGGAATGGAAAAAGTAATTCTGTTGCAACTACTGTCAGCGAAATTAAAACGCTTATCGGCATTTTATATTTGCACGGAATAATGCGGCCGACGCATGAAAAATGCACTGACCTTTGGCGAGGCGAATGTGGTGTACCATGCATTAGAAGTTCCATGAAATATGAAAGGTTTAAATTCCTAGTACAACACTTAAGTTTTGACAAAGAAGACGACGACGGCATTATACAATTTGATATCATGAAACGAATGCGTAAAGTATTCGAAATATTCGCGATGAATTGCAGAACAGCTCACGAGATTGGGAATATAGCAGTCATTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCATTTCGATATGATATTGATAAGAAACCATTGAAACGCGGTATAAAAATGGTACTTCTTGTGGACTCATCTACATTCTATATGAGCAATTTAGATGTCATTACTGACCCATATTTTGGTGCTGAAGAAATAACCAAAAAGTTAGTTCATCATTTAGCGGGAACGGGTAAAACTATTGTTATGGATAGTTGGTATACCTCTTCATCACTGATAGAACACCTTAGAAATGAGTATCAGTTACTTACTATAGCAGCATTACATCCACACAATGCTTGGATTCCACCATTGTTTCTTTCTCAGTATAGAAAATGCAGAACATTCATGTCTGGCTTTATTGATAATGATGTTTCACTTACATCTTATGTGAACACTGACATGAAGGCGATAAATATCATGACTAATGAGCCTAGATTTTACAGAAGAGGTCATGTCAATCAGACTACAGTTGTATCTGTGTACAAGAAGAATCAGTCAGCCGTGGAAGTTGGAGTGGAGAGCGAGAAAGATGAGGAGGAGGAAGAAGAAGAGTTGAATGAACCTGCTCAATCACTACCCAAAATGCCTAATATGCCGGAAGTTTCTATAACAGTAATGCGTCCAACAGGCGAAACGCTACACGCACGTCAAGGTATTCACCAGCTCGCTTCTAAAGACTGCCTCGTCTGCGGCCGCACCTACAGATACTCTCATAATGCCCGTCGTCATGAACTTACAGCtcacagttttgacagatacacaaacaaaataactCCCAAAAAAACACTCAGTCATCACCTCCAACCTAAATTGAGACCAAATCCATTCAACCCTAAGGCACGGTTGATGCCCAATCCTATTAGCcataaaatgcaatttatgtcgAAAAACGTCCCCACAAAAGTAGTACCcattaataaagttattacgCCACAGAAGCCCATACCAATTAAAGGGGCTAAAGCGGCACAAAATAATCTACCTTATCCTCTTCGTATTAAAGCACTCAAAGATTTACAGATAAAGAAAAAGGAACcacaaattttaaaaacattgttGACCTCTAAACCTGAGGTACTAGTGTCGGAACCCGAAATAATAAACTCTGGACCAGAAAGTCCAGAGACATTAATATCTGAACCCGAAATTGCTTCTTTTCAAGTAGAAGCGATTCTTTCTGAGCCTGATGCTGACGCTTATGATCAACAGCATGGAGACGAGGAGGTTGATGGAGATATACATAATAACCAAGGTCAAAATTATGACACAGTTGATATGAATTCAGAAAATGAAATTGAGATAGCTCGACAACAGGCTGATGAGATTGAAGGTGAAGAACAGGTCGATGGTGATGAGAATATGGATCAAGATGACAATAATATGGATGGCGGCCAAAGTGACAACGATCAAGATGTCGTTGATGACACAGCAGAAAGCCAAGAAAATATGGAAATGGCAGATGGCCTCGAAATCAAAGCAGAGCATGAGATGAAGGAAACTGAGGATGGTCCTGAGGAGGAAAGAGAGCAAGAAGAAATGGATATGAATCACACCATGAATGATGAAGACGACGATGATTTACCTATTTCAATACAACCAGTCGTTGAAATTAATGAAGATTTGCAGGTTGACTCGTTCAACACTGAATTGGGCGATGACGAACACGACGAAACCGTTGATCCTAATGAGGCTGTTGACGAAGAGGAGATCAAGGAACTTGATCCTGACAAAACATATGTCACAAAAACTCAGCGGGATTTCATTTTAAAGTATCGTGATGTTATTCAACAGATCAATACCAAACGTTGTTTGTGCTGTGACAGAGAACATCCACGCAGAAAAGCGGTTATTCAGCATTTGCAGAAAAATGGACACAAGGTACCTAAACATACCTGTTATAATTGCGTAATTACATTCGGGCATATCGGTGCTCTCCTCAGCCATATGAGGTCAAACTCTTGCACTGATTTATGGAAGATTATATATAACGAAAATGGTATTACCGATGACTTGGTTTTGGAGGATGAGCCTAAGGAGGTTAAAGTTCAGTATAAAGATATATTTAATGCTAGGTCCTATGCTTGCAAACTCTGTCCAGCAAAATTCCAATTGAAGCAGTTCATAATGAAACATGTTTTGGATGCTCATGAAGATGGGCAGTCTAGAGTGCCGCTTGGCTGTGTCCACTGTCGAGCTAGGTTCAAGGACAAGAGTTTGCTGAAGAAGCATATCCGTAAAGGCGACTGTACAGTTTATGTAGCGTGTGACTTATGTCCGGAGACGTTCGGGAATATGCAAAATTTCAATGACCATGCATTAGCTATTCATGCTGGTAATTTCGAATCAGATAGCCAGAGTAAGTGTGTCGACGGTCGCCCGACTGACTGTCCAATATGTGGAAAGAAAAATAGCAGTTATCCGAATTTGGTAAAACATTTGAAGATTATACACAATGAAGAAAAGCCTCATTACTGCCAACATTGCGATTCTAAATTCGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAGCATTCTGATAGAACTTTGGGCATGAATCTAAACCATGAGCCAGATATGTCCATCGTGAAGGAAGAGGCGGAAGAGTACCATTATTCATGTACTGAGTGCAACGCCATATTTGAGACTGTGGACGCGTGGACCGACCATCAGGTGGCCGAACACAATCAGGTGGCGCATCACTGTGACCAATGCGACAAGAAATTCTTACGTCCTTCTGAGCTTGCGGAGCACAAAAATACTCACTTGAGGGTTAAGTTCTATCCGTGCAGCGTTTGCGCTAACTCTTACAGTACTCCTCAAAAACTATCGGAACATGTACAGCAATCCCATCCAGGAATCGGCGCAATCGCTGCGGCAGATACTGAATTCTTTTGCGACATTTGTATCAGATCATTCAAAAGCCGTCAAGCGTATTCGAACCATATGCGCATACATGCTAAAGTACCAACCACTAATAGGAAACCAGGGGATCTAACCCCTACTTCTTCTAACAAAGGGTTCTCACCCTCTATCATAGGCAAACCCATCAAACAAGTATACCCAATGGTACAACCTGGTTTTGTGTCATTTAAACCTCATTACAATATTCCTAATGCACCATATTCATGTGACATTTGCGGTAAAGGATTCATGCACAAGAAGAATATATGGAAACACAAAAAAGTTTTACATGCTGATATACTAAATGAAAGAAACGACAGTGAAGAGAACACTATGCAGGCATCCACAGAAGAAGATGAATTCAATCCAGATGAAAATGGTGCTATTCTGTCCACGCCCCAATTTAATAGTTTCAACTTCGGCAACTTCGCGAACAATGTGCAACAAACACAACAAGATCCAATGCCGTATTCATGTGAATTATGTCTTAAGCGGTTTCCACTTAGAACTAGTTTGTGGAAACATAAACGCGCTAAACATGGCATTGTAAATCCTATTGCCAGTGGCGGTAATGATACGCAGGCGCCATCGGCAAGTGGCGAAGGAAGTAGTAGATCCAGTTGCACAATATGTAGAATTACCTTTTCAGATAAGAAATCTTATTACCGTCATAGAAAAAATGTTCACAAGTCCACCGTACAAATGTGCAAAATTTGTGGCAAACCTCTTAACTCAACTTTGGAATTGTATGAGCATTTAAAAGCTGCTCACGCCAGGGAACTGTTAGGGTACAACGCTAATCAAGGTTCCAGTAAATCGCATGAAGTATCACAAGACATGGAACCGGATTATGACAATGACCAAGAATCAGTGGACCCTAGTGTTGATTACCAAGCACGCTACCCTTGCGATACTTGTGGCAAACAATTTGTCGGTTTGTTAGCGTTACAGAACCACCAGTGCATAAATCAGGGCCCATCACAACCACAAACATTTGACTGTGAAATCTGCCACAAGAGTTATACCTCCATATCGGCTCTAAAGAGCCACCGTGGATGGCACTTACGGTCACCGGATGGAAAAGCAGCTGCTAATAACAGCGGGCTATGGATGCCCCAACACAAAGTCACGAGCAAAATAAGCAAACATGAAGTTATTGATCCAGTTCAGCTCGCTAAAGTCACGCACACGTCGAGTCCCGCCGCTGCAGTAGCGGCTAAGAGAAGACTTCCACCTGAGGTCGAAGTCACCGTTGTTAATCCAAACAAGAAAATGCGATCTGACGATTCAGTTGAATTAGAACAGCAAAATTCTTGTTCAGCTGAAGACAGGTACTGTACTATTTGTGATAAAGAGTTTACAAAACGTGCAGCTTATCAGCGCCACATGGATGAGGTGCATCAACCGAACTCTGTGTTCTGTCCAGTTTGTGATAAGAGTTTTACTAGAAAGTCGACGCTACTTATTCACATGAAGAAACACTATGAGAGTGGTGAAGGTGAAGGTAGTTCTAGCATGGTTGGTCAAGTTGAAGAAGAATTGCACACGTGCGATTTATGTGGAGCCCAATACGATGATGAACAATCGCTGAGAGCGCATCGAACGAGGCATCACGGCGAGGAGTCGGAAGAAGAAGACGATGAAGACGATGGAGAAGATGGCAATGTGCCCATTGCACCTCCAGGAGAGTTCACGTGTGGGCAATGTGGCGATGGCGTGGCTACGCCTCGGGATTTGATCGCTCACCGCACAATGCATGCTACTCCCACTAAATTCTTCTGTAACATTTGTAAAGTGTACTTTGCGAGAGCATTGGATCTCTCGTCCCATACCAGGGCTAGACACGCAGACAATGACAAGGTTTTTTTTCCTTGCGCAATGTGCGATAGGTTCTATATGAACAAGAAGAGTTTGCAGCGGCACATTGAGATGGCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVEISENDELPTNVCRKCMDNVNNWHIFKNVCERTQNKLQSLISKDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDSENATLANKVQPEGPPILASLGLTPRSDKKYVDPRMDWHRVYAILDMVQDNEVIDSLQSKEECDVLQHSDHDSDTEAELLPGIEDDYVDSKNGYICKNKKIISKNPKLSTSMNNLKIREAQQLRKQKLDIAKHHCPQPKNAWQLIFTDDLLELIVSSTNDNIVRNGKSNSVATTVSEIKTLIGILYLHGIMRPTHEKCTDLWRGECGVPCIRSSMKYERFKFLVQHLSFDKEDDDGIIQFDIMKRMRKVFEIFAMNCRTAHEIGNIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYMSNLDVITDPYFGAEEITKKLVHHLAGTGKTIVMDSWYTSSSLIEHLRNEYQLLTIAALHPHNAWIPPLFLSQYRKCRTFMSGFIDNDVSLTSYVNTDMKAINIMTNEPRFYRRGHVNQTTVVSVYKKNQSAVEVGVESEKDEEEEEEELNEPAQSLPKMPNMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLSHHLQPKLRPNPFNPKARLMPNPISHKMQFMSKNVPTKVVPINKVITPQKPIPIKGAKAAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADAYDQQHGDEEVDGDIHNNQGQNYDTVDMNSENEIEIARQQADEIEGEEQVDGDENMDQDDNNMDGGQSDNDQDVVDDTAESQENMEMADGLEIKAEHEMKETEDGPEEEREQEEMDMNHTMNDEDDDDLPISIQPVVEINEDLQVDSFNTELGDDEHDETVDPNEAVDEEEIKELDPDKTYVTKTQRDFILKYRDVIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPETFGNMQNFNDHALAIHAGNFESDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMNLNHEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQSHPGIGAIAAADTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDLTPTSSNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNPDENGAILSTPQFNSFNFGNFANNVQQTQQDPMPYSCELCLKRFPLRTSLWKHKRAKHGIVNPIASGGNDTQAPSASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSHEVSQDMEPDYDNDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQGPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHTSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSCSAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGEGSSSMVGQVEEELHTCDLCGAQYDDEQSLRAHRTRHHGEESEEEDDEDDGEDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00851013;
90% Identity: iTF_00405251;
80% Identity: -