Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994558.1:11745988-11779244[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8e-05 0.006 17.4 1.5 1 23 388 410 388 410 0.96

2 20 0.0016 0.12 13.3 2.1 1 20 416 435 416 438 0.94

3 20 1.9e-05 0.0015 19.3 5.6 1 23 458 480 458 480 0.98

4 20 0.00017 0.013 16.4 4.7 1 23 486 508 486 508 0.99

5 20 3.3e-05 0.0025 18.6 5.3 1 23 514 536 514 536 0.97

6 20 1.1e-05 0.0008 20.2 7.3 1 23 542 564 542 564 0.97

7 20 6.6e-07 5e-05 24.0 2.9 1 23 570 592 570 592 0.97

8 20 9.4e-05 0.0071 17.2 6.7 1 23 598 620 598 620 0.97

9 20 4.1e-05 0.0031 18.3 5.4 1 23 626 648 626 648 0.98

10 20 4.5e-07 3.4e-05 24.5 1.9 1 23 654 676 654 676 0.98

11 20 4.6e-05 0.0035 18.2 7.9 1 23 682 704 682 704 0.98

12 20 1.1e-05 0.00081 20.2 7.3 1 23 710 732 710 732 0.98

13 20 3.8e-06 0.00029 21.6 4.5 1 23 738 760 738 760 0.98

14 20 8.7e-07 6.6e-05 23.6 4.2 1 23 766 788 766 788 0.98

15 20 2.1e-05 0.0016 19.2 7.3 1 23 794 816 794 816 0.97

16 20 3.3e-07 2.5e-05 24.9 4.7 1 23 822 844 822 844 0.98

17 20 8.2e-06 0.00062 20.5 8.0 1 23 850 872 850 872 0.97

18 20 7.2e-07 5.4e-05 23.9 1.5 1 23 878 900 878 900 0.97

19 20 0.00067 0.051 14.5 0.3 1 23 907 929 907 929 0.96

20 20 0.00056 0.043 14.7 2.3 1 23 937 959 937 959 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8e-05	0.006	17.4	1.5	1	23	388	410	388	410	0.96
2	20	0.0016	0.12	13.3	2.1	1	20	416	435	416	438	0.94
3	20	1.9e-05	0.0015	19.3	5.6	1	23	458	480	458	480	0.98
4	20	0.00017	0.013	16.4	4.7	1	23	486	508	486	508	0.99
5	20	3.3e-05	0.0025	18.6	5.3	1	23	514	536	514	536	0.97
6	20	1.1e-05	0.0008	20.2	7.3	1	23	542	564	542	564	0.97
7	20	6.6e-07	5e-05	24.0	2.9	1	23	570	592	570	592	0.97
8	20	9.4e-05	0.0071	17.2	6.7	1	23	598	620	598	620	0.97
9	20	4.1e-05	0.0031	18.3	5.4	1	23	626	648	626	648	0.98
10	20	4.5e-07	3.4e-05	24.5	1.9	1	23	654	676	654	676	0.98
11	20	4.6e-05	0.0035	18.2	7.9	1	23	682	704	682	704	0.98
12	20	1.1e-05	0.00081	20.2	7.3	1	23	710	732	710	732	0.98
13	20	3.8e-06	0.00029	21.6	4.5	1	23	738	760	738	760	0.98
14	20	8.7e-07	6.6e-05	23.6	4.2	1	23	766	788	766	788	0.98
15	20	2.1e-05	0.0016	19.2	7.3	1	23	794	816	794	816	0.97
16	20	3.3e-07	2.5e-05	24.9	4.7	1	23	822	844	822	844	0.98
17	20	8.2e-06	0.00062	20.5	8.0	1	23	850	872	850	872	0.97
18	20	7.2e-07	5.4e-05	23.9	1.5	1	23	878	900	878	900	0.97
19	20	0.00067	0.051	14.5	0.3	1	23	907	929	907	929	0.96
20	20	0.00056	0.043	14.7	2.3	1	23	937	959	937	959	0.99

Sequence Information

Coding Sequence: ATGAATGCGGATCATCATAATATTAACACGGGTGGTGGCCAACCGCCTGGCAATTCGGAGGCTCAGAGTCAGAGAGTCCCATCGTCCCAGCAGCAGCAGTCCAGTAGTCTCCCTCCCACCACATCTGCTACTGATTTACGAGTAAATTCCGCGGCAGTCAACGTTGCCTTGTCGAGCGTCGCTAAATACTGGGTGTTCACGAATTTATTTCCTGGACCCATACCACAAGTGTCTGTATACGGCCTGCCTACGAGCGCCAGGCTGGAGAATGGAAAACCAGTCCAGGATCTCGGTCAAGCCCATCAAAGTATACTGAACGGTGATCCAAATATAATTCTGGGTCACCATGGTGGGCAGCAGTCAGTAGCTGTCTCGGCGTCTGGACAACAAATACCTGTATCACAAATAATTGCATCACAGGCAGGACAAGATGCCCTGGCTCACTCGCAGTCGGAACTCGGGTCTCAGCAGTCATCCTCGTCCAGCGCACAGGTCACTGCCGGGGGCTCCCAAACCTCGCACCAGGTACCCAATAACCGGGTGGAGTTTGTACAACACCATAACATTGATATGATCCAACTAACTGTGAGCGAGGATGGTATAGTGACAGTTGTGGAGCCAGGCGGCGGTAACAAGTTGGTCGACAAGGAGGAGCTACACGAGACCATCAAGATGCCGACAGACCACGCGCTCACCGTGCACCAGCTGCAGCAGATTGTGGGGCATCACCAGGTTATCGACAGTGTAGTACATATAGACCAAGGTACTGGTGACCCAGCAAATGTAATTGTGACACAGAATCCTGACGGCACCACCTCCATCGAGACCAGCTCCAGTGAACTCAGCCTGGCCCAGGTGAAAGATGAGAAGACAACCATCGCGATACCGGCAGACATCAAGGATATCAAGGGAATTGACTTGAAGAACGTCGGCGCAATGGGTATGGAAGGTACGGTTGTGAAGATATCGACGGGCTCGGATCAAGATCTACACACCATGTACAAAGTGAATGTGGAGGATCTATCGCAGCTGCTGGCCTACCACGAGGTGTTTGGGAAACTCAACACAGAGGCTGCACCGCAGGCTAAGGTCATAGCCGAAGTGGAGGTGATCCCAGGTACCAGCGGAGCGCTGGCAGAATCGGAGACCTCGCCAGGCCATCACGCCTGTGATATCTGCGGGAAAATATTCCAGTTCAGATACCAGCTAATAGTTCATAGGCGATATCACGGAGAAACCAAACCTTTTACATGTCACGTCTGCGGCTCGACCTTCGCGAATCCTGTTGAACTGTCAAGACACGGGAAATGTCATCTGGCCGCGGGAGATCCAGCCGAGCGTCAGGCGAAGCGGTTGGCGCAGGACAAGCCGTACGCGTGCACAACTTGCCACAAGACCTTCTCGCGGAAAGAGCATCTGGACAACCATGTGCGGAGTCATACCGGGGAAACTCCTTATAGATGTCAGTTTTGCGCCAAGACGTTCACGCGTAAGGAGCACATGGTGAACCACGTTCGCAAACACACGGGTGAAACCCCGCACCGCTGTGAGATATGCAAGAAGAGCTTCACGAGAAAGGAGCACTTCATGAACCACGTCATGTGGCATACCGGTGAAACGCCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGAGGTCCCATACGAACGATACTCCGTTCAGGTGTGAACTGTGCGGCAAGTCCTTCACCCGGAAGGAACATTTCACCAACCACATACTGTGGCACACCGGTGAGACCCCACACCGCTGCGACTTCTGTTCCAAGACGTTCACGCGTAAGGAGCACCTACTGAACCATGTCCGACAGCATACGGGCGAGTCGCCCCATCGCTGCAACTACTGCGCCAAGAGTTTCACGCGACGGGAGCACCTCGTCAACCACGTTAGACAGCACACTGGAGAAACGCCTTTCCAGTGCGGATACTGTCCAAAGGCTTTCACCCGGAAAGATCATTTAGTGAACCACGTCAGACAGCACACGGGCGAATCTCCCCACAAGTGTTCCTTCTGCACCAAGTCGTTCACGCGCAAGGAGCACCTGACCAATCACGTGCGGCAGCACACGGGGGAATCCCCGCACCGCTGCTCATACTGCAGCAAGAGCTTTACACGCAAGGAGCACCTCAATAACCACGTCAGACAGCACACCGGGGAGACTCCTCACAAGTGCACGTACTGCCCGCGCGGGTTCGCGCGCAAGGAGCACCTCACCAACCACATTCGCCAGCACACCGGCGACGTCCCCTACTCGTGCTCCTACTGCAGCAAGAGCTTCACGAGGAAAGAGCACCTGGTCAATCATATCCGACAACACACTGGCGAAACCCCGTTCAAGTGCACGTACTGCACAAAGTCGTTCTCGCGTAAGGAGCACCTGACGAACCACGTCCACCTCCACACCGGCGAGACGCCGCACAAGTGTCCGATCTGTACGAAAACATTCTCCAGGAAAGAGCACCTTACCAATCACGTCAGAATACATACGGGCGAGTCGCCGCATCGATGTGAGTTCTGCAACAAGACTTTCACGAGGAAGGAGCATCTGACGAACCACATGAAACAGCATTCTGGTGATTCAGTGCATCCCTGCAAGATATGCTCCAAGCCGTTCTCGAGAAAAGAATTGCTGGCTACGCATATGAGATCGCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGGGAATGCGGCAAGTCTTTCCCGCTGAAGGGCAACCTGCTCTTCCACGAGCGGTCGCACAACAAGGGCGGCGCCTCCAAGTTCCGATGCGACGTGTGCTCCAAGGACTTCATTTGTAAAGCCAATCTTATGGCGCACCGGCGCACGCACGTGGAGTCCGGGGAGGCGGCTGCCGAGGATTGTGGCGACTGCGACAAGGAGGAGCCCGTAGAGAGGAAACACAATATACGAGAACCGTCTGAGGGTAGATCAACGGAGAGTGTTGTTCAAAGCCAACAGAATACGTCCACAGTCATGCAACAGATCACAAATCAGCCACAAGTCCGAGCGCCCACGACCGGGTCGACCGTCGGTACGGGCAGCTTCGGCCACGCTACCGGCCATCACTCCGGCGCCGCCATCGCCCATCACACAGTCACTGTAAACTACTAG
Protein Sequence: MNADHHNINTGGGQPPGNSEAQSQRVPSSQQQQSSSLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTSARLENGKPVQDLGQAHQSILNGDPNIILGHHGGQQSVAVSASGQQIPVSQIIASQAGQDALAHSQSELGSQQSSSSSAQVTAGGSQTSHQVPNNRVEFVQHHNIDMIQLTVSEDGIVTVVEPGGGNKLVDKEELHETIKMPTDHALTVHQLQQIVGHHQVIDSVVHIDQGTGDPANVIVTQNPDGTTSIETSSSELSLAQVKDEKTTIAIPADIKDIKGIDLKNVGAMGMEGTVVKISTGSDQDLHTMYKVNVEDLSQLLAYHEVFGKLNTEAAPQAKVIAEVEVIPGTSGALAESETSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCHVCGSTFANPVELSRHGKCHLAAGDPAERQAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCSKSFTRKEHLNNHVRQHTGETPHKCTYCPRGFARKEHLTNHIRQHTGDVPYSCSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPICTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHMKQHSGDSVHPCKICSKPFSRKELLATHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGGASKFRCDVCSKDFICKANLMAHRRTHVESGEAAAEDCGDCDKEEPVERKHNIREPSEGRSTESVVQSQQNTSTVMQQITNQPQVRAPTTGSTVGTGSFGHATGHHSGAAIAHHTVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925938;
90% Identity: iTF_00744950;
80% Identity: -