Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: ZNF217
Assembly: GCA_015732765.1
Location: NC:81905020-81909175[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.02 0.57 10.5 0.1 3 23 203 224 201 224 0.93

2 16 0.00035 0.01 16.0 4.5 1 23 227 249 227 249 0.97

3 16 0.0031 0.087 13.1 0.4 1 23 265 288 265 288 0.91

4 16 0.00083 0.024 14.9 0.4 1 23 298 320 298 320 0.98

5 16 4 1.1e+02 3.3 0.4 6 20 328 342 326 344 0.91

6 16 0.083 2.4 8.6 0.4 2 23 354 376 354 376 0.86

7 16 0.11 3.2 8.1 0.0 2 21 381 400 380 401 0.94

8 16 0.26 7.3 7.0 0.2 2 23 418 440 418 440 0.95

9 16 0.0026 0.074 13.3 0.7 2 23 446 467 445 467 0.96

10 16 1.3e-05 0.00038 20.5 0.2 1 23 472 494 472 494 0.99

11 16 1.1e-05 0.0003 20.8 1.7 3 23 500 520 498 520 0.97

12 16 3.9e-05 0.0011 19.0 0.1 1 23 526 548 526 548 0.97

13 16 3.9e-05 0.0011 19.0 2.0 1 23 554 577 554 577 0.97

14 16 0.00075 0.021 15.0 2.4 1 23 583 605 583 605 0.97

15 16 0.016 0.45 10.8 0.1 2 23 612 634 611 634 0.95

16 16 0.0015 0.044 14.0 0.3 1 23 640 662 640 662 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.02	0.57	10.5	0.1	3	23	203	224	201	224	0.93
2	16	0.00035	0.01	16.0	4.5	1	23	227	249	227	249	0.97
3	16	0.0031	0.087	13.1	0.4	1	23	265	288	265	288	0.91
4	16	0.00083	0.024	14.9	0.4	1	23	298	320	298	320	0.98
5	16	4	1.1e+02	3.3	0.4	6	20	328	342	326	344	0.91
6	16	0.083	2.4	8.6	0.4	2	23	354	376	354	376	0.86
7	16	0.11	3.2	8.1	0.0	2	21	381	400	380	401	0.94
8	16	0.26	7.3	7.0	0.2	2	23	418	440	418	440	0.95
9	16	0.0026	0.074	13.3	0.7	2	23	446	467	445	467	0.96
10	16	1.3e-05	0.00038	20.5	0.2	1	23	472	494	472	494	0.99
11	16	1.1e-05	0.0003	20.8	1.7	3	23	500	520	498	520	0.97
12	16	3.9e-05	0.0011	19.0	0.1	1	23	526	548	526	548	0.97
13	16	3.9e-05	0.0011	19.0	2.0	1	23	554	577	554	577	0.97
14	16	0.00075	0.021	15.0	2.4	1	23	583	605	583	605	0.97
15	16	0.016	0.45	10.8	0.1	2	23	612	634	611	634	0.95
16	16	0.0015	0.044	14.0	0.3	1	23	640	662	640	662	0.96

Sequence Information

Coding Sequence: ATGCAGTTCGACCTGGTCAGGGACACCACCAAGCTTTGCCGAGTGTGCTTGACGGATAGCGTTGGACATCGCACCGACCTGTACGAAGCCCTAGTATCTGACCAGACTAGCTTGCACGAAATGCTGAAAGCCATTTGCGCCACCGTATTCGATAAATCCAACGCTGAGTGTCCACCCGGCATGCCTACGACGGTTTGCGCCGACTGCCGGAATAATATCCTCGTGGCTTTCAAGCTGCACCAGTCTTGCATCGATAGTGAGCGTCGGCTGATAGAGCTGTTGGCGCTAAAGTGGGAGCTTCGAGATCTGAAGAGTGAGGATGAATCCGGAGATCCACTTAAGTCCGTCGGTGAGGAAGCGCcgcaagaaaaaatgttaagcGTTGAATTGGAAAGTCAAGTTAAGCTCCAACGAGAAATGCATCTTCTCGAGGAGGAGCAACCAAAAGACGAGATGGAAGATTCACTTTTAGATAGTGAGCATGGAGAAACGATAAAGGTTGAAGAATTAGATTTGATCGACGTGGACGACAACGAAAACGGCGATATTTCTGAAACTGGTGAGACCATAGAACCTTCCGTCGAAGAAAACACGAGCAATATCATCTGTAACATTTGCTCGACGTCGTTTGGTGATGCTGCCATATTGAGAAAACACATGACCCTAACACATCAGTTGCACATGTGCGAGTTTTGtccaaaatctttcaaaatccGCGCAAGTTTTACTCGTCATCGGCGGCGACACTTCAAGAAGCATCCGGAGAGAGGCTCATCCGGAACGCGGAAGGTGTATTCTTGTCAATATTGCGAGGAAACGTTCAAAGTGGGTATGCAACTTAAGAGACACAAAGCAGCTGTCCATCGGAATGTAAAAGATCCGGATCAACCTTTCACGTGCAGATTATGCGCGGAATCGTACGCAACGGCATCGGAGCTGTTGACTCACAAAAAAACGCATGAAAACCCAGTTAACTGTTCATGTGGACGTAGATTTAAAAACGATATGAGATTACAAACTCATACCGTGTCCGGAACGTGCTCAGGTGATAACGATAGAAGGTGTAAAATATGTAATAAAGTCTACAAATCGGTCGACATCATGCTCAGACATCGCAACGCGGTGCATTCCGAGCCCGTCGTATGTCCCGAGTGTGGTCAGACGATGGCGAACCTCGCCAGCATGCGAATGCATTTGCGGATCGGATTCTGTTCCGCACAACCTCCGACGAAGTCTGTGATAGCTGCCAGAACCTGTAAGATTTGTGGCGAAGAACAGAAAAACCGTTACGCTGTAAAAGGTCACATGATACGAGCGCATCCGGATCGTATGCTTCGCTGCGATATGTGCAGTATGGAATTTAGAACTCAAAGATATCTTGATTTGCACATACAATACCACAAATCCAAAACGTTCCAATGTAAAATTTGTGACGAAATTGTGTCCTCAAAAGATGCTCTGGTGAAGCATCGACGAATCCACAGAGACCCAATCGCGTGCTCagtttgtgacaaaaagtttgcTTCCAAACATACTCTTACTACCCACATGGAGCGACACATAGGCCTAAAACCGTTCGCTTGTGACGTTTGTCCGATGCGGTTTATTACGAAAATTGAGTTCCAAGCTCACATGCTTACGCACACCAAGCAACAGGACCATGTTTGTGATCTTTGCGGGTCTcggttcacaaaaaaatattcgttGAAGGCACATATCAAGCGAGTTCACGAGGGTATTCGTCCCTTCGCGTGCTCACAGTGCAGTTTAAGGTTTTCCACCGCACATCGACTGCAGATCCACATGTACACCCATACCGGGGAAAAACCGAACAAGTGTGAACTTTGCCCGCAGGCGTACGCCCAAACCAACGATCTGGTCAAGCACGTGGCCCGCGCCCACGGCGATGGCAATCCGTACCTTTGCGACCTGTGCGACGAGGGGTTCAAGCTAATGACGGACCTGCGCCAGCACTATCGGGTGCATGTGCAATCGACGGAAGGTGGCGCCGACCAGATGGAGGAGGTGCGCTTCACCAGTGTGACGATTCTGAAGAGGGCGTTCGCTAAAGCGAGACAGCGGGAGGAGGCCGAAAGAGGCTCATAg
Protein Sequence: MQFDLVRDTTKLCRVCLTDSVGHRTDLYEALVSDQTSLHEMLKAICATVFDKSNAECPPGMPTTVCADCRNNILVAFKLHQSCIDSERRLIELLALKWELRDLKSEDESGDPLKSVGEEAPQEKMLSVELESQVKLQREMHLLEEEQPKDEMEDSLLDSEHGETIKVEELDLIDVDDNENGDISETGETIEPSVEENTSNIICNICSTSFGDAAILRKHMTLTHQLHMCEFCPKSFKIRASFTRHRRRHFKKHPERGSSGTRKVYSCQYCEETFKVGMQLKRHKAAVHRNVKDPDQPFTCRLCAESYATASELLTHKKTHENPVNCSCGRRFKNDMRLQTHTVSGTCSGDNDRRCKICNKVYKSVDIMLRHRNAVHSEPVVCPECGQTMANLASMRMHLRIGFCSAQPPTKSVIAARTCKICGEEQKNRYAVKGHMIRAHPDRMLRCDMCSMEFRTQRYLDLHIQYHKSKTFQCKICDEIVSSKDALVKHRRIHRDPIACSVCDKKFASKHTLTTHMERHIGLKPFACDVCPMRFITKIEFQAHMLTHTKQQDHVCDLCGSRFTKKYSLKAHIKRVHEGIRPFACSQCSLRFSTAHRLQIHMYTHTGEKPNKCELCPQAYAQTNDLVKHVARAHGDGNPYLCDLCDEGFKLMTDLRQHYRVHVQSTEGGADQMEEVRFTSVTILKRAFAKARQREEAERGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400823;
90% Identity: iTF_00400824;
80% Identity: -