Cqui009807.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- dl
- Assembly
- GCA_015732765.1
- Location
- NC:12157962-12159916[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-72 1e-68 230.3 0.1 1 169 10 180 10 180 0.98 2 2 0.41 8.7e+02 -0.5 0.4 123 167 479 522 458 524 0.60
Sequence Information
- Coding Sequence
- ATGGCCACGCCGTCCCAGAAACCGTACGTGGTCATCACCGAACAGCCCCAGTCCAAGGGTTTGCGCTTCCGATATGAGTGTGAAGGTCGCTCGGCGGGATCAATCCCGGGTGTGCGGAGTACAACGGAACACAAGACACATCCGACGATCGAGTTGCGCGGCTATAAGGGTCGTGCCGTGGTGGTGGTGTCCTGCGTGACCAAGGATCCGCCGTACCGGGCCCACCCGCACAACCTGGTTGGGAAGGATGGCTGTAAGGAGGGCGTATGCACGGTGGTGCTGAACAGTGCCACGATGAGTTACACGTTCAACAACTTGGGCATTCAGTGCGTCAAGAAGAAAGACATCGAGGGAGCACTGAGGACGCGGGAAAAGCTGCGCGTTGATCCGTACAAGACCGGCTTTGGACACGTGAAACAACTGGCCACGATCGATTTGAACGCGGTGAGGTTGTGCTTCCAGGTGTTTATCGAGGGCCAACAGCCGGGACGGTTCTCGGAACCGCTGCAACCTGTGGTGTCGGATGTTATCTACGACAAGAAGGCCATGTCGGAGTTGGTGATCTGCAAGTTGAGTCACGTGACGGCACCCACTGCTGGAGGGAAGGAAATTATCATTCTCTGTGAAAAAGTCACTAAAGAGGACATCTCTGTGCGGTTCTACGAAGAACGGGACGGAAGAATCGTTTGGGAGGACGTTGGCGAGTTTCAGCACAACAACGTCCACAAACAGGTCGCGATCTGTTTCCGAACTCCTCGATACCACACGCTGGAGACCTCCCAGCCTGTGATGGTCAACATCCAGCTGAGAAGACCATCCGACGGAGCTACCAGCGAACCTCTTCCCTTCGAGCTTCTTCCACTTGACGCCACCGGACTGTCTCAGAAACGAAAACGACCCAAGTTCAACAGCTCCGAGGTGCTGGAACAAAGCCACGGTGGAGCACCTCCCGCTGGATCCTACGGACAGATGCTTCCGACCGTCGGCGAACATGTCAAACTCGAACCTCGCGAACAGCTGTTCGGCTTCCAGGGACCCTACCGCAACCCGAACGAGTCCCCCGAGCACTCTCCAGGAATCCCCAACGCATACCCGGACCCCAACTTCCCAGGTCCCGCGTCCACCCAGCCCAACGACTTCTTCCAGCAGTACCCACCAAACCACTACAACTACCCGCCAAAACCCACCCAACAATATCCGAACCAACAACAGTTCCAGCCCAACTTCCCCATGACCCAACAGCCCGGACCAAGCACCTCGACAGCGCCTCAACCCACCTGCCAGCAGATGGCTGCAGCCCCCGGAGTGCCACCCCAGGAGTACAATCTGAGCAGCCTGCTGGACATGGACATTGGGCGGGACTTTGCCATGAACTCGTCCGAGATCAAGTCCATCATGGGGCACTTTTCGACGGCAGCGTCAGTAGCTGTGCCAACggaacagcaacagcagcagtatCAGCAGCAAGTGCAGACAGTGCAGCAGCAGATGGTGCATCGGATGCACCAGGACGAGGAGGAGAATCTGTCCAACAGTTTTACACGGCTGACGACGAATCCGATGAATGATTTGAACAAGTTGAGTTGA
- Protein Sequence
- MATPSQKPYVVITEQPQSKGLRFRYECEGRSAGSIPGVRSTTEHKTHPTIELRGYKGRAVVVVSCVTKDPPYRAHPHNLVGKDGCKEGVCTVVLNSATMSYTFNNLGIQCVKKKDIEGALRTREKLRVDPYKTGFGHVKQLATIDLNAVRLCFQVFIEGQQPGRFSEPLQPVVSDVIYDKKAMSELVICKLSHVTAPTAGGKEIIILCEKVTKEDISVRFYEERDGRIVWEDVGEFQHNNVHKQVAICFRTPRYHTLETSQPVMVNIQLRRPSDGATSEPLPFELLPLDATGLSQKRKRPKFNSSEVLEQSHGGAPPAGSYGQMLPTVGEHVKLEPREQLFGFQGPYRNPNESPEHSPGIPNAYPDPNFPGPASTQPNDFFQQYPPNHYNYPPKPTQQYPNQQQFQPNFPMTQQPGPSTSTAPQPTCQQMAAAPGVPPQEYNLSSLLDMDIGRDFAMNSSEIKSIMGHFSTAASVAVPTEQQQQQYQQQVQTVQQQMVHRMHQDEEENLSNSFTRLTTNPMNDLNKLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400321;
- 90% Identity
- iTF_00400321;
- 80% Identity
- -