Cpip017734.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- dl
- Assembly
- GCA_016801865.2
- Location
- NC:174104795-174106509[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-72 1.2e-68 230.9 0.1 1 169 10 180 10 180 0.98 2 2 1.1 1.5e+03 -0.5 0.4 124 166 485 526 463 529 0.56
Sequence Information
- Coding Sequence
- ATGGCCACGCCGTCCCAGAAACCGTACGTGGTCATCACCGAACAGCCCCAGTCCAAGGGTCTGCGCTTCCGATATGAGTGTGAAGGTCGCTCGGCGGGCTCTATCCCGGGTGTGCGGAGTACGACGGAACACAAGACACATCCGACGATCGAGCTGCGCGGCTACAAGGGTCGTGCCGTGGTGGTGGTGTCCTGCGTGACCAAGGATCCGCCGTACCGGGCTCATCCGCACAACCTGGTTGGGAAGGATGGCTGCAAGGAGGGCGTTTGCACGGTGGTGTTGAACAGTGCCACGATGAGTTACACGTTCAACAACTTGGGCATTCAGTGCGTCAAGAAGAAGGACATCGAGGGAGCACTGAAGACGCGGGAAAAGCTGCGCGTTGATCCGTACAAGACGGGGTTTGGACATGTGAAGCAACTGGCCACGATCGATTTGAATGCGGTGAGGTTGTGCTTCCAGGTGTTTATCGAGGGTCAACAGCCGGGACGGTTCTCGGAACCGCTGCAACCTGTGGTGTCCGATGTTATCTACGACAAGAAGGCCATGTCGGAGTTGGTGATCTGCAAGCTGAGCCACGTAACGGCACCCACTGCTGGAGGGAAGGAAATTATCATTCTTTGTGAGAAGGTAACAAAGGAGGACATCTCGGTGCGGTTCTACGAAGAACGGGAGGGAAGAATCGTTTGGGAGGACGTTGGCGAGTTTCAGCACAACAACGTCCACAAGCAGGTCGCGATCTGTTTCCGAACTCCTCGATACCATACGCTGGAGACCTCCCAACCCGTGATGGTCAACATCCAGCTGAGAAGACCATCGGACGGTGCTACCAGCGAACCTCTTCCCTTCGAGCTACTCCCACTTGACGCCACCGGACTGTCTCAGAAGCGGAAACGACCCAAGTTCAACAGCTCCGAGGTGCTGGAACAAAGCCACGGTGGAGCACCTCCTGCCGGATCCTACGGACAGATGCTTCCGACCGTCGGCGAACACGTCAAACTCGAACCTCGCGAACAGCTGTTCGGCTTCCAAGGACCCTACCGTAACCCCAACGAGTCCCCCGAGCACTCTCCAGGAATCCCCAACGCAGCCCCCCTCCCATACCCGGACCCCAACTTCCCAGGTCCCGCGTCCACCCAACCCAACGACTTCTTCCAGCAGTACCCACCAAACCACTACAACTACCCCCCGAAACCCACCCAACAATATCCGAACCAACAACAGTTCCAGCCCAACTTCCCCATGACCCAACAGCCCGGACCAAGCACCTCGACAGCGCCTCAACCCACCTGCCAGCAGATGGCCCTAGCCCCCGGAGTGCAGCCCCAGGAGTACAATCTGAGCAGCCTGCTGGACATGGACATTGGGCGGGACTTTGCGATGAACTCGTCCGAGATCAAGTCCATTATGGGACACTTTTCGACGGCAGCGTCAGTAGCTGTGCCGACggaacagcaacagcagcagcagtatcaGCAGCAAGTTCAGACGGTACAGCAGCAAATGGTGCATCGGATGCACCAGGACGAGGAGGAGAATCTGTCCAACAGTTTTACACGGTTGACGACGAATCCGATGAATGATTTGAACAAGTTGAGTTGA
- Protein Sequence
- MATPSQKPYVVITEQPQSKGLRFRYECEGRSAGSIPGVRSTTEHKTHPTIELRGYKGRAVVVVSCVTKDPPYRAHPHNLVGKDGCKEGVCTVVLNSATMSYTFNNLGIQCVKKKDIEGALKTREKLRVDPYKTGFGHVKQLATIDLNAVRLCFQVFIEGQQPGRFSEPLQPVVSDVIYDKKAMSELVICKLSHVTAPTAGGKEIIILCEKVTKEDISVRFYEEREGRIVWEDVGEFQHNNVHKQVAICFRTPRYHTLETSQPVMVNIQLRRPSDGATSEPLPFELLPLDATGLSQKRKRPKFNSSEVLEQSHGGAPPAGSYGQMLPTVGEHVKLEPREQLFGFQGPYRNPNESPEHSPGIPNAAPLPYPDPNFPGPASTQPNDFFQQYPPNHYNYPPKPTQQYPNQQQFQPNFPMTQQPGPSTSTAPQPTCQQMALAPGVQPQEYNLSSLLDMDIGRDFAMNSSEIKSIMGHFSTAASVAVPTEQQQQQQYQQQVQTVQQQMVHRMHQDEEENLSNSFTRLTTNPMNDLNKLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401479;
- 90% Identity
- iTF_00401479;
- 80% Identity
- -