Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284488.1:46803915-46808370[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.2e-07 2.4e-05 26.1 0.7 1 23 278 300 278 300 0.99

2 12 1.6e-05 0.0018 20.2 7.1 1 23 306 328 306 328 0.98

3 12 6.9e-06 0.00077 21.4 0.8 1 23 334 356 334 356 0.99

4 12 0.061 6.7 9.0 3.2 1 23 362 384 362 384 0.95

5 12 0.00073 0.082 15.0 0.5 1 23 390 412 390 412 0.97

6 12 1.8e-08 2e-06 29.6 3.7 1 23 418 440 418 440 0.99

7 12 2.8e-06 0.00031 22.6 1.4 2 23 446 467 445 467 0.97

8 12 2.4e-06 0.00027 22.8 2.8 1 23 473 495 473 495 0.99

9 12 4.9e-06 0.00055 21.9 0.7 1 23 500 522 500 522 0.97

10 12 3.2e-06 0.00036 22.5 4.1 2 23 529 550 528 550 0.98

11 12 7.9e-08 8.8e-06 27.5 1.8 1 23 556 578 556 578 0.99

12 12 1.7e-05 0.0019 20.2 3.3 1 23 584 606 584 606 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.2e-07	2.4e-05	26.1	0.7	1	23	278	300	278	300	0.99
2	12	1.6e-05	0.0018	20.2	7.1	1	23	306	328	306	328	0.98
3	12	6.9e-06	0.00077	21.4	0.8	1	23	334	356	334	356	0.99
4	12	0.061	6.7	9.0	3.2	1	23	362	384	362	384	0.95
5	12	0.00073	0.082	15.0	0.5	1	23	390	412	390	412	0.97
6	12	1.8e-08	2e-06	29.6	3.7	1	23	418	440	418	440	0.99
7	12	2.8e-06	0.00031	22.6	1.4	2	23	446	467	445	467	0.97
8	12	2.4e-06	0.00027	22.8	2.8	1	23	473	495	473	495	0.99
9	12	4.9e-06	0.00055	21.9	0.7	1	23	500	522	500	522	0.97
10	12	3.2e-06	0.00036	22.5	4.1	2	23	529	550	528	550	0.98
11	12	7.9e-08	8.8e-06	27.5	1.8	1	23	556	578	556	578	0.99
12	12	1.7e-05	0.0019	20.2	3.3	1	23	584	606	584	606	0.98

Sequence Information

Coding Sequence: ATGTCAGATCAACTAGTTTTTCACGAAAGAAATAGTCCTCATGGACTCACGATGGAAAATATGTTTCATGTGGCGGACTGTTGTCGAGCGTGTCTTCGAATCGAGTGTTCTTTGACCCCTACAACCACACAAGACAATGATTCGATCAAGTTTTGTGACAAGCTGATAGCTTGTGTGTCTGAAGTGGTTTGGATGAAAGAAGGTCTTCCATCTTTAATATGCACAACATGTATAGAGCGGCTGCGAATAGCCTACGATTTTCGAACAGTTTGTCTTCAGTCCGACAACACACTACAACGTTACATAAGTCACCTCCAAGATGAAGCGAAGCAAACAATAAATGGCCAAAGGCCTCTTACAACacctacaaaatttgattttgggaTTCCTACAGGTACTCATGACAATCTGCCTTGTATTATAGAAGAACCACAAAATGCGGAATATCTCCATCTCAAACATTTCCTTGATAATGACGAAGAGTTATCGAAATCAGACCATTTGGTGGATGCGGCCACGTCTCGAAGCACAAGTCCTGATTCAGCTGCAGTTGCTGTTAGTTTTATGAATAGTCACACACAGAATGATTTACAACAGCATCAACAACAGCATCATCAGCAAGAACAGcaacaacagcagcagcagcaacaacacCATTATAAAATTGAGCGACAAACGATGCACATGCAGGAGCAGCATGTTCAAATCGAGGAACCGCCACAAATACAACAGTTTAAACCACCAAGGCAAGTTATTAAACGCACCACTGGAATACAAGTTCGGCCACCCACTCCATCTGCAATGCAAGCAGATGGTGTTGATCTTAAACCATTTACTTGTGCCGTATGTGGTAAGAACTATAGGAAAAATGCTAACTTGCGTATACACATGAGAACCCATACTGGAGAGAAACCGTTCGAGTGTCGGTACTGTGAAAAAAGGTTCTATCATTCATCTCATCTTCGTGAACATATTCGAAGgcacacaggagaaaagccattccAATGTGCTGTTTGTAATAAAAGATTTACTATCAAAGGTGAACTTACAATGCATATGAAGTcccacactggagaaaaaccttatgCCTGTACATGCTGTGATCGACGGTGTTTAACAGCTGCTGACCTTAAGGTGCATATGAGAACCCATACgggagaaaagccatttgccTGTGTGACTTGTGGAAAAAAATTTGCCAgcacatatattttaaattcacacATTAAAACCCATACAGGTGAAAGGCCATATTCATGCACAGTTTGTGATAAAACCTTTACGCAATCTTCCCACTTGAATGTGCACATGCGTaaacatacaggagaaaaagtTAGTTGTAAAGTCTGTGATGCAAAGTTTACTCATTCTTCACAATTAACAGTCCATATGCGGGAACATACGGGAAAGCAGCCGTACAAGTGCACTATGTGTGATAAAGTTTGCAATTATGCATCTGAATTGCAGACACACATGATGAAACATACTGGCGAAAAATTTGCTTGTGTAACTTGCGATAAGAAATTTACAACTGCTGCTTATTTACAAGAACACACTCGTACCCATACCGGTGAGAACTTATCAACATGTACTATATGTGATCGTCAATTTACAAGGCACCAATATTTAGAAAAGCACATGCGAACTCATACCGGTGAGAAACCGTACACTTGTTTTACTTGTGGAAAGAAATTCACCCAGTCGTCGTCCTTAAAGGTTCATATTCGAattcatacaggagaaaaaccgtATCATTGTCAGATTTGTGATCGCAGATTTACAACTTCTTCTGATTTGTCTGCTCATAATAAGAAACATAAGAAgtatattaatttgtaa
Protein Sequence: MSDQLVFHERNSPHGLTMENMFHVADCCRACLRIECSLTPTTTQDNDSIKFCDKLIACVSEVVWMKEGLPSLICTTCIERLRIAYDFRTVCLQSDNTLQRYISHLQDEAKQTINGQRPLTTPTKFDFGIPTGTHDNLPCIIEEPQNAEYLHLKHFLDNDEELSKSDHLVDAATSRSTSPDSAAVAVSFMNSHTQNDLQQHQQQHHQQEQQQQQQQQQHHYKIERQTMHMQEQHVQIEEPPQIQQFKPPRQVIKRTTGIQVRPPTPSAMQADGVDLKPFTCAVCGKNYRKNANLRIHMRTHTGEKPFECRYCEKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFACVTCGKKFASTYILNSHIKTHTGERPYSCTVCDKTFTQSSHLNVHMRKHTGEKVSCKVCDAKFTHSSQLTVHMREHTGKQPYKCTMCDKVCNYASELQTHMMKHTGEKFACVTCDKKFTTAAYLQEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPYTCFTCGKKFTQSSSLKVHIRIHTGEKPYHCQICDRRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00466620;
90% Identity: iTF_00838808; iTF_00789537; iTF_01518282; iTF_01345870; iTF_01295380; iTF_00978618; iTF_01284957;
80% Identity: -