Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000056.1:17519754-17521816[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.1e-08 2.6e-05 26.6 0.8 1 23 287 309 287 309 0.99

2 12 2.9e-06 0.00083 21.9 7.2 1 23 315 337 315 337 0.98

3 12 1.1e-05 0.0032 20.1 0.8 1 23 343 365 343 365 0.99

4 12 0.037 11 9.0 3.2 1 23 371 393 371 393 0.95

5 12 0.00045 0.13 15.0 0.5 1 23 399 421 399 421 0.97

6 12 1.1e-08 3.1e-06 29.5 3.7 1 23 427 449 427 449 0.99

7 12 1.7e-06 0.00049 22.6 1.4 2 23 455 476 454 476 0.97

8 12 4.3e-06 0.0012 21.4 2.8 1 23 482 504 482 504 0.99

9 12 3.1e-06 0.00087 21.8 0.7 1 23 509 531 509 531 0.97

10 12 2e-06 0.00056 22.4 4.1 2 23 538 559 537 559 0.98

11 12 4.9e-08 1.4e-05 27.5 1.8 1 23 565 587 565 587 0.99

12 12 8.2e-07 0.00024 23.6 1.6 1 23 593 615 593 615 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.1e-08	2.6e-05	26.6	0.8	1	23	287	309	287	309	0.99
2	12	2.9e-06	0.00083	21.9	7.2	1	23	315	337	315	337	0.98
3	12	1.1e-05	0.0032	20.1	0.8	1	23	343	365	343	365	0.99
4	12	0.037	11	9.0	3.2	1	23	371	393	371	393	0.95
5	12	0.00045	0.13	15.0	0.5	1	23	399	421	399	421	0.97
6	12	1.1e-08	3.1e-06	29.5	3.7	1	23	427	449	427	449	0.99
7	12	1.7e-06	0.00049	22.6	1.4	2	23	455	476	454	476	0.97
8	12	4.3e-06	0.0012	21.4	2.8	1	23	482	504	482	504	0.99
9	12	3.1e-06	0.00087	21.8	0.7	1	23	509	531	509	531	0.97
10	12	2e-06	0.00056	22.4	4.1	2	23	538	559	537	559	0.98
11	12	4.9e-08	1.4e-05	27.5	1.8	1	23	565	587	565	587	0.99
12	12	8.2e-07	0.00024	23.6	1.6	1	23	593	615	593	615	0.98

Sequence Information

Coding Sequence: ATGTCAGACCAGCTAGTTTTTCACGAACGAAGCAGTCCCCATGGACTTACGATGGAAAACATGTTCCATGTGGCGGACTGTTGCCGCGCGTGTTTGCGGATCGAGTGCTCCCTCACGCCGACCTCGACGCCAGACAACGACTCCATCAAGTTTTGCGACAAGTTGATTGCCTGCGTCTCGGAAGTCGTTTGGATGAAAGAAGGGCTTCCCTCATTAATATGCACGACATGTATAGAACGCTTACGAGTGGCATACGATTTCCGTACCGTGTGCTTGCAGTCGGACAACACCCTGCAGCGATACATCAGCCATTTGCAAGATGAAGCCAAACAGACGCTGAACGGGCAACGTCCACTTGTAACACCCACCAAATTTGATTTTGGGATTTCCACAGGTACCCACGATAATCTGCCTTGCATCATTGAAGAGCCTCAAAATGCAGAATATCTTCACCTTAAGCATTTTCTGGACAATGATGAGGAATTGTCAAAATCAGAACATTTGGTTGACGCAGCTACATCTCGAAGTACAAGTCCTGATGTTAACACAGTTGGTGTTGGAACAGTAGGTTACATGAATCATCAAGTGCATATGCAAAATGACCTgcagcagcagcaacaacaTGTGCATCATCACCATCAGCAACAGCACTCGCATCAACAGCAACAGCAACAGCAACATTATAAGCTTGAACCTATGCCACAGATGCAAATCGCAGAGCAGCACATGCAGATGGAGGAGCAGCCACAGGTACAAGAATTTAAACCTCCTAGACAGGTTATTAAGCGCACTACAGGAATTCAGGTGCGGCCACCAACTCCATCCAGCATGCAAGGAGATGGTGTCGATCTCAAGCCTTTCACATGTGGAGTATgtggaaaaaattataggaaaaatgCTAATTTGCGTATACATATGAGAACACATACTGGAGAAAAACCCTTTGAGTGTAAATACTGtgaaaaaagattttatcaTTCGTCACATTTGCGGGAGCACATTCGTAGGCATACTGGAGAAAAGCCGTTTCAATGTGCAGTGTGCAGCAAAAGATTTACCATAAAAGGTGAGCTAACAATGCATATGAAATCACACACAGGTGAGAAACCATATGCTTGTACTTGCTGTGATCGGCGATGTTTAACTGCAGCTGATCTTAAAGTGCACATGCGGACTCATACAGGTGAGAAGCCATTTGCTTGTGTTACATGTGGAAAAAAGTTTGCAAGcacttatattttaaattctcatATTAAGACCCACACAGGGGAAAGGCCGTACTCGTGTACTGTTTGTGATAAAACTTTCACTCAGTCATCTCATTTAAATGTGCATATGCGGAAGCATACTGGAGAGAAAGTTAGTTGTAAAGTATGCGATGCAAAGTTTACACACTCATCTCAGTTAACAGTTCATATGAGAGAGCACACCGGAAAGCAGCCTTATAAGTGTACAATGTGcgataaaatttgtaattatgcATCTGAGCTGCAGACGCACATGATGAAACACACAGGGGAAAAGTTTGCATGTGTGACCTGTGACAAGAAGTTTACCACTGCTGCCTACTTACAGGagcacacacgcacgcacactGGTGAGAACTTGTCCACGTGTACGATATGTGACAGGCAATTTACAAGACATCAATATTTGGAAAAACATATGCGGACACACACCGGAGAGAAGCCTTACACGTGCTTCACTTGTGGCAAGAAGTTCACGCAGTCGTCGTCTTTAAAGGTCCACATCCGTATCCACACGGGAGAGAAGCCCTATCAATGTCAGATTTGCGACCGTCGATTCACTACTTCGTCTGACTTGTCTGCTCAcaacaagaaacataaaaagtacattaatttgtaa
Protein Sequence: MSDQLVFHERSSPHGLTMENMFHVADCCRACLRIECSLTPTSTPDNDSIKFCDKLIACVSEVVWMKEGLPSLICTTCIERLRVAYDFRTVCLQSDNTLQRYISHLQDEAKQTLNGQRPLVTPTKFDFGISTGTHDNLPCIIEEPQNAEYLHLKHFLDNDEELSKSEHLVDAATSRSTSPDVNTVGVGTVGYMNHQVHMQNDLQQQQQHVHHHHQQQHSHQQQQQQQHYKLEPMPQMQIAEQHMQMEEQPQVQEFKPPRQVIKRTTGIQVRPPTPSSMQGDGVDLKPFTCGVCGKNYRKNANLRIHMRTHTGEKPFECKYCEKRFYHSSHLREHIRRHTGEKPFQCAVCSKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFACVTCGKKFASTYILNSHIKTHTGERPYSCTVCDKTFTQSSHLNVHMRKHTGEKVSCKVCDAKFTHSSQLTVHMREHTGKQPYKCTMCDKICNYASELQTHMMKHTGEKFACVTCDKKFTTAAYLQEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPYTCFTCGKKFTQSSSLKVHIRIHTGEKPYQCQICDRRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00466620;
90% Identity: iTF_00399747;
80% Identity: -