Vsat102223.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vesta saturnalis
Gene Symbol
-
Assembly
GCA_036346205.1
Location
JARFJB010001633.1:198931-200945[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 5e-08 4e-05 27.3 1.3 1 23 273 295 273 295 0.99
2 12 8.7e-06 0.0069 20.3 7.1 1 23 301 323 301 323 0.98
3 12 3.7e-06 0.003 21.4 0.8 1 23 329 351 329 351 0.99
4 12 0.032 26 9.0 3.2 1 23 357 379 357 379 0.95
5 12 0.00039 0.31 15.0 0.5 1 23 385 407 385 407 0.97
6 12 1e-08 8e-06 29.5 3.5 1 23 413 435 413 435 0.99
7 12 8.4e-07 0.00067 23.4 1.4 2 23 441 462 440 462 0.97
8 12 1.3e-06 0.001 22.9 2.8 1 23 468 490 468 490 0.99
9 12 2.7e-06 0.0021 21.9 0.7 1 23 495 517 495 517 0.97
10 12 1.7e-06 0.0014 22.5 4.1 2 23 524 545 523 545 0.98
11 12 4.2e-08 3.4e-05 27.5 1.8 1 23 551 573 551 573 0.99
12 12 9.1e-06 0.0073 20.2 3.3 1 23 579 601 579 601 0.98

Sequence Information

Coding Sequence
ATgtcaaatcaattaatatttCAAGAAAGAAATAGTCCGCCCAATGGACTCACTATGGAAAATATGTTTCACGTCGCTGATTGCTGTCGAGCGTGTTTACGAATTGAATGTTCCTTAACCCCTACGACAACTCCGGATAATGATTCTATTAAATTCTGCGACAAGCTAATTGCTTGTGTTTCTGAAGTGatGTGGATGAAAGAAGGTCTTCCTTCGTTGATTTGCACAACGTGTATAGAACGTCTTCGTGTTGCTTACGATTTTCGATCAGTCTGTCTGCAATCCGATAATACCTTACAAAGGTATATAAGTCACCTACAAGATGAAgcgaaacaaacaataaatggtcAAAGACCTTTAACAACACCTACCAAATTTGAGTTTGGCATAGCTAGTGGAAATGAAAATTTACCCTGTATTATAGAAGAACCGCAAAATGCAGAATATCTGCATCTTAAACACTTCCTAGATAATGATGAAGAACTTACGAAGTCTGATAATTTAGTGGATACGACTTCACGAAGTACGAGTCCTGAATCGAATGCAGTTGCTGtaagttttattaataataatcatcACCCTCAAGAAAATCAACCTATTcatcagcaacaacaaatacatcaGCAGCATCAAGAGCAGTTACATTTCGATCGGCCTGTTATGCATTTGCAGGAACAACATGTGCAGATTGAGGAACATGTTAATCAATTACAGCAGTTTAAGCCACCTAGGCAAGTTATTAAGCGTACTACTGGGGTACAGGTTAGGCCACCTACTCCATCTAGTGTCCAAGGTGAAGGTAGTGATCTTAAACCATTTACATGTACAGTGTGTGGTAAAAATTACCGAAAAAATGCTAACTTACGTATTCATATGAGAACTCACACAGGAGAAAAACCATTTGAATGTCGTTATTGTGAGAAACGATTTTATCATTCATCACATTTACGGGAACACATCAGAAGGCATACAGGAGAGAAACCGTTTCAGTGTGCCGTGTGCAATAAACGTTTTACTATTAAGGGGGAACTCACTATGCATATGAAATCTCACACGGGTGAGAAACCATATGCGTGTACTTGCTGTGATCGGCGTTGTTTGACAGCAGCAGATTTAAAGGTACACATGAGAACTCACACAGGTGAAAAACCATTTGCATGTGTAACTTGTGGTAAAAAGTTTGCTAGCACATACATTCTAAATTCTCATATTAAAACTCACACTGGCGAGAGACCATATTCATGTTCTGTTTGTGATAAAACGTTTACACAATCTTCTCATTTAAATGTACATATGCGGAAGCATACAGGAGAAAAGGTTAGCTGTAAAATATGTGATGCCAAGTTTACTCATTCATCTCAGCTTACTGTTCATATGCGTGAGCACACAGGAAAGCAGCCTTATAAATGCACAATGTGTGATAAAGTCTGTAATTATGCCTCAGAATTACAAACTCATATGATGAAACATACTGGAGAGAAGTTTGCATGTGTAACTTGTGATAAAAAATTTACGACTGCTGCTTATTTACAAGAACACACACGGACTCATACTGGAGAAAATTTGTCTACGTGTACAATATGTGATAGACAATTTACGAGGCATCAATATTTAGAAAAGCACATGCGCACTCATACTGGTGAAAAACCATACACTTGTTTTACATGTGGAAAGAAATTCACACAATCATCCTCATTGAAAGTGCATATTCGTATACATACAGGTGAAAAACCATATCACTGTCAAATATGCGATCGTAGATTTACAACGTCATCAGACTTATCAGCTcacaataaaaaacataaaaagtacattaatttgtAA
Protein Sequence
MSNQLIFQERNSPPNGLTMENMFHVADCCRACLRIECSLTPTTTPDNDSIKFCDKLIACVSEVMWMKEGLPSLICTTCIERLRVAYDFRSVCLQSDNTLQRYISHLQDEAKQTINGQRPLTTPTKFEFGIASGNENLPCIIEEPQNAEYLHLKHFLDNDEELTKSDNLVDTTSRSTSPESNAVAVSFINNNHHPQENQPIHQQQQIHQQHQEQLHFDRPVMHLQEQHVQIEEHVNQLQQFKPPRQVIKRTTGVQVRPPTPSSVQGEGSDLKPFTCTVCGKNYRKNANLRIHMRTHTGEKPFECRYCEKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPYACTCCDRRCLTAADLKVHMRTHTGEKPFACVTCGKKFASTYILNSHIKTHTGERPYSCSVCDKTFTQSSHLNVHMRKHTGEKVSCKICDAKFTHSSQLTVHMREHTGKQPYKCTMCDKVCNYASELQTHMMKHTGEKFACVTCDKKFTTAAYLQEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPYTCFTCGKKFTQSSSLKVHIRIHTGEKPYHCQICDRRFTTSSDLSAHNKKHKKYINL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00466620;
90% Identity
iTF_00399747;
80% Identity
-