Cvid006965.1
Basic Information
- Insect
- Cryptus viduatorius
- Gene Symbol
- -
- Assembly
- GCA_964006125.1
- Location
- OZ023222.1:14160098-14164531[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.013 1.2 10.1 2.1 1 23 348 370 348 370 0.95 2 19 0.031 2.8 8.9 0.6 2 23 417 438 416 438 0.95 3 19 0.00077 0.069 14.0 0.6 1 23 510 532 510 532 0.97 4 19 0.0071 0.64 10.9 0.7 2 23 537 558 536 558 0.96 5 19 9.9e-06 0.00088 19.9 1.4 2 23 651 672 650 672 0.97 6 19 8.9e-06 0.00079 20.1 2.7 1 23 677 699 677 699 0.96 7 19 0.00038 0.034 14.9 0.2 1 21 705 725 705 729 0.92 8 19 2.5e-05 0.0022 18.7 2.5 1 23 814 837 814 837 0.95 9 19 5.9e-05 0.0052 17.5 3.9 1 23 898 920 898 920 0.97 10 19 0.00033 0.03 15.1 0.7 1 20 925 944 925 946 0.94 11 19 0.002 0.18 12.7 0.5 2 23 957 978 957 978 0.96 12 19 1.5e-05 0.0014 19.3 0.7 2 23 1017 1038 1016 1038 0.97 13 19 3.1e-05 0.0027 18.4 1.6 1 23 1043 1065 1043 1065 0.95 14 19 0.00015 0.013 16.3 2.0 1 23 1071 1093 1071 1093 0.98 15 19 5.5e-06 0.00049 20.7 0.4 1 23 1109 1131 1109 1131 0.95 16 19 1.7e-06 0.00016 22.3 0.3 1 23 1137 1159 1137 1159 0.99 17 19 3.3e-05 0.0029 18.3 0.3 1 23 1165 1187 1165 1187 0.98 18 19 0.00018 0.016 16.0 4.1 1 23 1193 1215 1193 1215 0.96 19 19 0.013 1.1 10.2 0.4 1 20 1221 1240 1221 1242 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTACAGATTGATACGGCGGAAGATGCTCAAAACGACGAGGCCATAGATACGACAGTGCCGGAGGTATGCCGCGTTTGTTTACTCGGCAACTTATTGATGAGAGATCTATTCGTCGAGAACGAAGTTGTTTCATTGTCGACGAAGGCAATGAGTTTCGCGAGCGTGAAGATGCTACCCGGTGATGGTTTGCCAGGACAAGTCTGCTGCGAATGCGCAGACAAATTGGATAACGCTTATGAATTTAAGCTGCAAGTGGAACAGGCGGACAACGTACTGCGACAGAGATACGATTCTCTGAATATCAAGGAAGAACTTTTCTTCAATGAGGTTGAAGTCCATCTAGATGAAGGAGAACGGAGCGAAGATCCTCATACGCTTGAAGTTGACGTGCATTATCAAGCTACCGTAGATAGTTTGACCGCCGAAGATGCCGAGGATGACAAGCCTACACTTTTAAAGGATCATCTGGCTCTGCTACAAGTAGAGAAACTCTCGGAGGAGCAATGTGAAGGTGTAGctgaccAAAAAGAAGCGGAAGAAATGGTCGAGCAATCGAACGTCGCGGCTATTCTCGAGTCCAACGATGATCATGCGGAGTATCTTCACGATGAAAATCCTGAAGCGATGGCCGAAGTTTACCGACAATCTGTGAAAGCTGAGGGTATCAACGACACCGAAGGAATAACGATCGAGGAGCACAATTATATAATGCAGCAGGGCTACACGTTGACGAGAAACGAGGAAGAATTAGCGCAGGATAGCGTCGATTCGGTTGCTCACGAGTCCGCCGAATATTTGACATTGATGGACGACGATCCGAACGAAGTGGAGACGCTGACCGAGCCGAAGATCGAGGAGTCACATCGGGAGGAAGAGCCGAGCGAAAAACTCGAGAATTCGCCTAGCGAAACTCGTCGCAGTAAAAGGAAGTTGATAAAACGCGCGCGCAACTCGGAcgaggaaaattattttgagaATCTGAATCTCAGtagtcgattgaaaaaaacgcaaagcGAGAAGCCGGAAAAAGTATTTCTCTGTTATCTGTGCGACAAGCAATTCATATCGAAGGACATACTAAAGGAGCACATGCACTCACATGAGGAGGTGAGACGCGCGTTATCGTTgaagaaaagcgaaaaaatagaaaaacggCACTCGACATCGACGAAATCAAGTGGAGCCGTTGCGTCGGTCGGTCAATCGGGTTCCTCATCGTCTTCCGGCAAACGAGCGAACAAGTGTCCGTACTGCGGCAAAGAATATCTCTACGTTATATCGTTCAACAAGCATTTGAAGCAACACGAGAGAAACAAAGATTCGTCGAAGGACGCTTCGATGTCGATGGAAGAATCGTTTGACGGTGACGAGAATTCGTCGGATTTTGCTGGTTACGAAGACACACCTATGTCCGACACGAGAAGCAGAATTGAACAAGAAAACGGGGAGGATGCGATCGACGATTCGAGTCCCGAGCGTAAGAAACGACGGAGAAAATCCGTCCGTTCCGAGGCGATTTATTATTGCGACAAATGTACGGAAAAATTCTCCACGAAGCGCGCACTCGGCGAGCACACGATCGTCCACGATACGAGTCTGAAATGCAACACGTGCGACGAAgagttcgatgctctcgagAAGCTTCGACGACATCGTTCGCAACACGTTGTCGAAGGGGTTCTGACGGAACAGGATCTCGTCGATAACGTTTACGAGAGAGAATTCGAAAGCGAAGTGCCAGACGAAGGGGTAAACGTTATGTACGAAGACACGGAAATGTCCGAAACTCATCTCGTAACCGGAAGTCAGGATCAACAACGCGAAGAAGAAACTGAAGCAATATTAGAGTCCGGTGTGGAAAACGAATGGCATCTTGATGTAACGGAAGCCGAGAGCgagaatcgcgaaataaacgAATCTCGCAGCTCCGAAACCGAATTAAAATGTCCGAATTGTCCGATGAGCTATTCGCACAAAAAATCATTGGCCCGACACATGGAGAGTCACGAGGGAACGATATACTCGTGCAAAATttgcaaacaaaaattcacCCGCAAGGATTATCTTCAGCGTCACGTCGAGCAACACGCGAGAACGAAGTCATTCAAATGCACGGAGTGCGGCAAGATATTCGGTAACGAATTGACGCTGCGCAATCATCTGATCGCGACGAATCACAAGACGATAGTTCACGGACAGGAATACGATCCGAATAAGCGACTGAAACGAGTCGCCGCGAAGGCCGCGCAGAagataattgataaaattaaaacCGAAGACGGCCTCGAGGAGTACGGCGAGGAAGAGGAGGAGACCGCTGTAGAGGGTAGAAATTCCAAGGGTAACGGGCGATGGGCgagaaacgaggaaaagaTACATCCGACAGCGTCGTCGAGAAAGGCGCAGCATCGCAATCGTCGAAGATCCGATTTCGAGTGCGAGACTTGCGGACGCAAGTGCAGCTCGAAGGCGTCGTTGACGAAGCACATGGAGCAGCAACACGTTAAAGGGGAAAAATCCGATATCGTaccgaaaatcgaaaagattggaaaaaataatatttcggaAGTTTGCGAGAGGGCTGCGGGCGCCGCGAAGGACGATCGTGTCGACGAAGATGATGACGAGGAGGAAGACAATAATTCCGATTTCGAAAGCGGTCTCGACTGGCCGATGGATAATCACGAGTGTCCGACTTGCAAGAAAAAATACAGTACGAAAAAATCACTTCTTCGTCATCAGTTGCTGCACGAGGAGCCGAATTTCGAATGCGACATATGCAAcgttaaattttatcgcaaaGACAAACTTAAAGCTCATTACGACAAATGCTCGGAGAAAAATCCGGATCAGGTGAGAAAATGTAACATTTGCGGGGACAGTTTTGAAAACAACGAAATGCTGAAGGAACATCGAGGGAAACACGTGGACGAGGGAATATTAACGGAGGAGGATCTGCGGGAAATAGAGCCGGGAATCGACGATAGAAAAGAATCGGGCAAAGTCCCGAGAAAGCGTCGTACCGACATCGTCGGTCTCGAATGTACGGAGTGCAACAAGCGCTACACATCGCGAAAGGGTCTGCTGCGACACATACAGGTTCACGAGGGTAAAAAATATCTGTGCGACATATGTCcaaagaaattttatcgacggGAACATCTAAAGATTCACGTTGCCAAACACAATATGATAAAACCGTACAAATGCACGCGTTGCACGAAACGTTTCATAAAGGAAGATCAGCTAGCGAATCATTTGTCGAAACACGATCGTACCTTCAAGAAAACAAAGGAAACCGATAGttcgaaaagatttttatgcGAAATATGTTCGAAGAGTTTTACGCAATCGACGACGCTGATAGCGCATCTGAGAGCTCACAACGGTATAAAACCATACGTTTGCGAAGTTTGCGCGCGTCCATTCACGACAAACGCTTATCTGAAGATGCACATGCGAACGCACACGCAGGAGAGACCTTACAGTTGTCAGTATTGTTCGAGAGCCTTCGCTCGTGCCGATACGCTTGCCAATCATTTGACATCGCACACCGGCGAGGCGAAGTATCATTGCAAGTAttgtccgaaaaattttcggcgaTTGAAATCGTTGAAGGAACACGTTTTCATTCACACGGGACAGCGGCCGTACGCGTGTCCAACGTGCGATCGTCGTTTCAACAACAACGGTAGTCGTTACGCTCACAGCAAGAGATGCAAGCAAAATTTGTTGCACAATCAAAATCGCAATCAAACAACGATGCCAAATACGATTGTACAGAATGTAACGGTGCCGCAACCCATTAGGATACATCAGATAACCGGTGATCACGGGGCAACGCAAATGCAAGTCGTTAAGTCGCAGAGtataaaaacaataacgaTCGCAAGACCGAGCGATCAATTGACCGCTCATCAAGTGATGCAGCATCAAGAAATACTCATGCCGCTTATTCTACCGCTGACCGTAACACTGACCGACGTCGACGAGGAAGTCATACTACCCGAGGGTACCAAGATATTTACCAcagcttaa
- Protein Sequence
- MDAVQIDTAEDAQNDEAIDTTVPEVCRVCLLGNLLMRDLFVENEVVSLSTKAMSFASVKMLPGDGLPGQVCCECADKLDNAYEFKLQVEQADNVLRQRYDSLNIKEELFFNEVEVHLDEGERSEDPHTLEVDVHYQATVDSLTAEDAEDDKPTLLKDHLALLQVEKLSEEQCEGVADQKEAEEMVEQSNVAAILESNDDHAEYLHDENPEAMAEVYRQSVKAEGINDTEGITIEEHNYIMQQGYTLTRNEEELAQDSVDSVAHESAEYLTLMDDDPNEVETLTEPKIEESHREEEPSEKLENSPSETRRSKRKLIKRARNSDEENYFENLNLSSRLKKTQSEKPEKVFLCYLCDKQFISKDILKEHMHSHEEVRRALSLKKSEKIEKRHSTSTKSSGAVASVGQSGSSSSSGKRANKCPYCGKEYLYVISFNKHLKQHERNKDSSKDASMSMEESFDGDENSSDFAGYEDTPMSDTRSRIEQENGEDAIDDSSPERKKRRRKSVRSEAIYYCDKCTEKFSTKRALGEHTIVHDTSLKCNTCDEEFDALEKLRRHRSQHVVEGVLTEQDLVDNVYEREFESEVPDEGVNVMYEDTEMSETHLVTGSQDQQREEETEAILESGVENEWHLDVTEAESENREINESRSSETELKCPNCPMSYSHKKSLARHMESHEGTIYSCKICKQKFTRKDYLQRHVEQHARTKSFKCTECGKIFGNELTLRNHLIATNHKTIVHGQEYDPNKRLKRVAAKAAQKIIDKIKTEDGLEEYGEEEEETAVEGRNSKGNGRWARNEEKIHPTASSRKAQHRNRRRSDFECETCGRKCSSKASLTKHMEQQHVKGEKSDIVPKIEKIGKNNISEVCERAAGAAKDDRVDEDDDEEEDNNSDFESGLDWPMDNHECPTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEMLKEHRGKHVDEGILTEEDLREIEPGIDDRKESGKVPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLANHLSKHDRTFKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLHNQNRNQTTMPNTIVQNVTVPQPIRIHQITGDHGATQMQVVKSQSIKTITIARPSDQLTAHQVMQHQEILMPLILPLTVTLTDVDEEVILPEGTKIFTTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841280;
- 90% Identity
- iTF_00397499; iTF_00841280;
- 80% Identity
- -