Basic Information

Insect: Cryptus armator
Gene Symbol: -
Assembly: GCA_963971235.1
Location: OZ020235.1:19102385-19104802[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.2e-05 0.0017 19.7 4.2 1 23 281 303 281 303 0.99

2 15 0.012 1.8 10.2 4.1 1 23 309 332 309 332 0.97

3 15 9e-06 0.0013 20.1 1.8 2 23 432 453 431 453 0.97

4 15 1.6e-06 0.00023 22.5 1.9 1 23 459 481 459 481 0.98

5 15 0.00033 0.049 15.1 0.8 1 23 487 509 487 509 0.98

6 15 3.7e-06 0.00055 21.3 1.3 1 23 524 546 524 546 0.98

7 15 7e-06 0.001 20.4 1.2 3 23 554 574 552 574 0.98

8 15 1.4e-05 0.002 19.5 1.6 1 23 580 602 580 602 0.97

9 15 0.00085 0.13 13.9 0.2 1 23 608 630 608 630 0.99

10 15 6.5e-06 0.00096 20.5 0.3 1 23 636 659 636 659 0.94

11 15 1.9e-05 0.0028 19.0 1.3 1 23 665 687 665 687 0.98

12 15 0.00042 0.062 14.8 4.7 1 23 693 715 693 715 0.98

13 15 6.3e-06 0.00093 20.6 0.2 1 23 721 744 721 744 0.96

14 15 5.1e-06 0.00075 20.8 0.9 1 23 750 772 750 772 0.97

15 15 3.7e-06 0.00055 21.3 4.5 1 23 778 800 778 800 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.2e-05	0.0017	19.7	4.2	1	23	281	303	281	303	0.99
2	15	0.012	1.8	10.2	4.1	1	23	309	332	309	332	0.97
3	15	9e-06	0.0013	20.1	1.8	2	23	432	453	431	453	0.97
4	15	1.6e-06	0.00023	22.5	1.9	1	23	459	481	459	481	0.98
5	15	0.00033	0.049	15.1	0.8	1	23	487	509	487	509	0.98
6	15	3.7e-06	0.00055	21.3	1.3	1	23	524	546	524	546	0.98
7	15	7e-06	0.001	20.4	1.2	3	23	554	574	552	574	0.98
8	15	1.4e-05	0.002	19.5	1.6	1	23	580	602	580	602	0.97
9	15	0.00085	0.13	13.9	0.2	1	23	608	630	608	630	0.99
10	15	6.5e-06	0.00096	20.5	0.3	1	23	636	659	636	659	0.94
11	15	1.9e-05	0.0028	19.0	1.3	1	23	665	687	665	687	0.98
12	15	0.00042	0.062	14.8	4.7	1	23	693	715	693	715	0.98
13	15	6.3e-06	0.00093	20.6	0.2	1	23	721	744	721	744	0.96
14	15	5.1e-06	0.00075	20.8	0.9	1	23	750	772	750	772	0.97
15	15	3.7e-06	0.00055	21.3	4.5	1	23	778	800	778	800	0.99

Sequence Information

Coding Sequence: ATGTCCAGTCCCCGTTGTCGCATTTCGCCGATAAGAATTAATCATAGAGCTCAGATAGACGTGATAGACATGCGAGACGAGAATTCAAAAATGTACAATCACCTCTTGATCTACGAAGAGCAATACTCAAAATTTATCGTTTTGAGAGCCTTGCGTAGCGCGGATCCCGGCGAAGTTGCCGTTCAGCTCGTCGATATCGTAACGACAATCGGAGCGCCGCGAATAATTCAGAGCGGAAACGGACGCGATTACGCGGAACAGGTAGTTCGAGAGATTCGTCTATTGCTCCGAGATTTTTGCGTCGTGCACGGCGACGCGGCGAAAAACGTCGATAAAcctcgagatttcaagaatatGATAAAATCGTGGATGAgcaaaaattcggaaaaattatgGCACGATGCATTGGCGATTCTTCAAGTCGCGGAGAACACGGCGTCGAATTCGCGAAACAACACGGCGCCGAGTCAGTTGTTTTTCGGTCGAAATATTTGCGACGATTTGCGACGAACGATCGGCGGAAAGAGTTTACTCGGGAGCGTCGGAGCGACGGACGAGGAAGTGATCCCAATTGCCTCGAAGGATCGCAATTCTTTCGCGATTTCGATAAAAGATCCTTTTCCAGTTTCGATCAGCAAAGCGGTGGAAATCgtgagagagacagagaaacaTTCTCGAGACGATAACGCAGAGAACTTCAATGAGAAATCAACGATAGCCAAGGAAAACGTAAATAGCTTTAATTTCGTGAATGTAAAAAACGAATCGCCGATCATCGGAGCCGATACCGCGAGTCTTCATTCGGACGAAGAAGAACGCGTTAATTCCGACAAATACAATTTTCGTTGCAAAATCTGCCAGAAGCAGTACGTGAAACTCGGACATCTGAGAAATCACATGAAAACTCACGCGAGAGTCGGAAACTACGAGTGTACAATTTGTTGCAAAACTTTCCGACTCTCGAGTCTCTACGACAAGCATATGGAAAGATTTCACGAGGAGAAGGACAACGCTACTCTCGAAACTTGCGATCGATTGAAGGAAATCGAAAAAGACGAGATAagcgaaaaaaacgataaattcaaagaaaatgAGGAAATCAGTATGAAAAAAACGCGGCGGGATGAGAAATCCGAGCAAATCAATGCTGCGTCggagaagcgaaaaaaatcgcCTTCGTCTCTATCATCCCCGAGAGTATTGGCAAAAAAGCACTCGAAACGAAGTTCGAGTtccgttttaaaaaaaaagctgaataaTTCAACGACAAAACTAAACGGCAATCCATTACTCGAATGTACTTATTGTAagcaaaaattcaattttcccAGTGTGCTGAAGAGGCACATGCGTTCGCACACGAACGAGAGACCCTACGTTTGCAAGGTGTGCGGCAAGAGTTTCAAACAACTCGGTCATCTGAGTCAACACTCGTTAACGCACACGGATTATCGTTCCTTTCAGTGTACGATATGCTCAATAAAATTTGATTCTCTAGATTCGCTAAAGCTTCATTCGCAATCTCACAAAGACGAGGCGGTCTACAGACCCAAAGAGATTTATCGTCTTTTCGAATGCGATAGTTGCAAAAAAGTATTCACGACGAAGAGCGTTCTCGAGCGGCACATATTCACGCATTCGCATGAGCGTCAATTCGGCTGCAAGGTGTGcggaaaaaggttcaaacaggCCGGTCACGTTAAATCTCATATGCTTGTGCACACGGGAGAACGTAAATTCGCGTGTACCATTTGCTCGAAGCGATTCAGTCTCtcgaattcattgaaaaaacatATGTACGTTCACAACGGCGAGAAACCCTATCAGTGCGATGTTTGTGGCGCGAGATTTCTCGAAAAGCGTAATCTCAACGGTCATCTAATGACGCACACGAACGAGAGACCATTTTCTTGTAAAATATGCGGTAAGCGTTACACTCTCGCAGATACGCTTCGTCGTCACATAAGTGCGGCTCACGAAGACGGGCGTACGTATCAGTGCGAAATTTGCgcgaaaatgttcaaacaattgGCGCACCTGTCGGTGCACAAGAAAGTTCACAACGACGAGAGACCCTTTCAGTGTCATTTGTGCGAAAAGAATTTTAAACACAAAAATGTACTGAAATCTCATTTAGCGATTCACGCGAATGTTAGGCCCTTCGAGTGCGACGTTTGCAAAGCGACATTTGTGCGCAAAACCAATCTTCAGACTCACATTGCCTCGGCGCACATGAACGAACGTCCGTACGTTTGTACGATTTGCAACAAAAGATTCAAACAGATAAGTCATTTAAACGGTCACATTGTTGTTCACAGCAACTCGATGCCTTATCAGTGCGACTTTTGCGATCGACGGTGCAACAGACTCGATAATCTCAAGAAACACATGAGACTGCATACGAagaacaaagaataa
Protein Sequence: MSSPRCRISPIRINHRAQIDVIDMRDENSKMYNHLLIYEEQYSKFIVLRALRSADPGEVAVQLVDIVTTIGAPRIIQSGNGRDYAEQVVREIRLLLRDFCVVHGDAAKNVDKPRDFKNMIKSWMSKNSEKLWHDALAILQVAENTASNSRNNTAPSQLFFGRNICDDLRRTIGGKSLLGSVGATDEEVIPIASKDRNSFAISIKDPFPVSISKAVEIVRETEKHSRDDNAENFNEKSTIAKENVNSFNFVNVKNESPIIGADTASLHSDEEERVNSDKYNFRCKICQKQYVKLGHLRNHMKTHARVGNYECTICCKTFRLSSLYDKHMERFHEEKDNATLETCDRLKEIEKDEISEKNDKFKENEEISMKKTRRDEKSEQINAASEKRKKSPSSLSSPRVLAKKHSKRSSSSVLKKKLNNSTTKLNGNPLLECTYCKQKFNFPSVLKRHMRSHTNERPYVCKVCGKSFKQLGHLSQHSLTHTDYRSFQCTICSIKFDSLDSLKLHSQSHKDEAVYRPKEIYRLFECDSCKKVFTTKSVLERHIFTHSHERQFGCKVCGKRFKQAGHVKSHMLVHTGERKFACTICSKRFSLSNSLKKHMYVHNGEKPYQCDVCGARFLEKRNLNGHLMTHTNERPFSCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDVCKATFVRKTNLQTHIASAHMNERPYVCTICNKRFKQISHLNGHIVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00841279;
90% Identity: iTF_00398272;
80% Identity: -