Basic Information

Gene Symbol
dmd-4
Assembly
GCA_013387265.2
Location
JABFTP020000021.1:27451373-27462168[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-24 3.2e-20 73.4 13.4 1 47 11 57 11 57 0.98
2 2 0.037 7.5e+02 1.8 1.6 29 35 235 241 233 244 0.87

Sequence Information

Coding Sequence
ATGCTTTCAATAAGTAGGTCTGCAGCTGCAAGAGTCCCAAAATGTGCTAGATGTCGTAATCATGGAATGATTTCTAAGCTGAGAGGTCACAAGAAACATTGCATATATAAAAACTGCTCCTGTGAAAAATGTGGACTTATAAAAGAACGACAGAGAATTATGGCTAAACAGGTTGCTTTAAAACGTCAGCAAGCTGCTGAAGATGCTATTGCACTACACCTTGCGTCAGCTCAGTCGGGTACAAAATATGAGTACCTCCCTCCTGGTCGAATCTATGGAATGCAAGTTACTTCTCCAGAACCAACCTCTCAACCATTAGATGAAAAATTAGTCGAGGAAACCATCCAAGAATCTTCTCAGGATGAAATAGTGGTGTCGTCGGCATCCCTTAATATGCTCAGCAAATTATTTCCGAACAAAAAACGCGCTGTTCTTGAATTGGTATTGAAAAGATGCAACCACGATCTTCTACAAGCTATAGAACACTTCAACAGTAACCCATCAAAATCACAAGAAGTAAAAGAGGAAACGAATTCCGCTTTCAAACCTGTTGGAAATAAAGCATCCAGATTGATTACTGCGCATCAGAATAATTCTCCATTATTCACTTCGAATAAAGTATTCATGCATAGTATTTATCCACTTTTACCTTGGTTTAATTCTGCACAAGTTTTGCCAAGTCCTGTATATGTTCCGGGTTTTTGTGAATGTGAGCAATGCAAACATAATATTTACGCAGGTTTGGAAAATAGGCCGTGA
Protein Sequence
MLSISRSAAARVPKCARCRNHGMISKLRGHKKHCIYKNCSCEKCGLIKERQRIMAKQVALKRQQAAEDAIALHLASAQSGTKYEYLPPGRIYGMQVTSPEPTSQPLDEKLVEETIQESSQDEIVVSSASLNMLSKLFPNKKRAVLELVLKRCNHDLLQAIEHFNSNPSKSQEVKEETNSAFKPVGNKASRLITAHQNNSPLFTSNKVFMHSIYPLLPWFNSAQVLPSPVYVPGFCECEQCKHNIYAGLENRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00349142;
90% Identity
-
80% Identity
-