Csep025687.1
Basic Information
- Insect
- Coccinella septempunctata
- Gene Symbol
- dmd-4
- Assembly
- GCA_907165205.1
- Location
- OU015577.1:32778866-32781949[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-24 4.3e-20 72.5 13.5 1 47 21 67 21 67 0.98 2 2 0.039 5.6e+02 1.7 1.6 29 35 245 251 243 254 0.87
Sequence Information
- Coding Sequence
- ATGGATGAGATAAGGACCAAATTTGATAAAATGTTATCTGTGAGTCGTTCTGCAGCAGCCAGAGTACCGAAATGTGCAAGATGTCGAAACCATGGGATGATATCGAAGTTGAGAGGGCATAAAAAGCACTGCATCTACAAAAACTGCGCCTGTGAAAAGTGTGGGTTGATCAAAGAAAGACAAAGAATTATGGCGAAACAGGTGGCTCTCAAACGCCAACAGGCAGCAGAAGACGCCATAGCTCTTCATCTAGCATCAGCCCAATCAGGAACCAAATACGAGTACCTTCCACCAGGCAGAATCTACGGCATGCAGGTAACATCGCCAGAACCAGCAAGTCCAGATCTACCAGAAGCCAAAACTCCGGAAGACTCCAAGGAATCAAGTCAAGAGGAGATAGTGGTTTCATCCGCCTCCTTGGACATGCTAGGCAAGCTTTTCCCGCACAAGAAGCGAGCTGTCTTGGAGCTAGTGCTCAAGAGATGCAACCACGACCTACTTCGCGCTATAGAGCACTTCAACAATAGCGGGGTTAGCAAGATTTCGGAGGTAAAGGAAGAGACAAGTTCTGCATTCAGACCTGTGGGTAACAAGAACGCCAGAGTTGTTCCTGGTCATCAGAATATCCCTCTCATACCGTCAAACAAAGTCTTCATGCACAGTATCTACCCTTTGCTGCCTTGGTTCAATTCAGCCCAAGTTTTACCAAGCCCTGTCTACGTGCCTGGTTTTTGCGAATGCGAGCAATGCAAGCATAATATTTATGGTGCTTCAGATAACAGGATTTGA
- Protein Sequence
- MDEIRTKFDKMLSVSRSAAARVPKCARCRNHGMISKLRGHKKHCIYKNCACEKCGLIKERQRIMAKQVALKRQQAAEDAIALHLASAQSGTKYEYLPPGRIYGMQVTSPEPASPDLPEAKTPEDSKESSQEEIVVSSASLDMLGKLFPHKKRAVLELVLKRCNHDLLRAIEHFNNSGVSKISEVKEETSSAFRPVGNKNARVVPGHQNIPLIPSNKVFMHSIYPLLPWFNSAQVLPSPVYVPGFCECEQCKHNIYGASDNRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394536; iTF_01023924; iTF_00416540; iTF_00130550; iTF_00998710; iTF_00020305; iTF_00965214;
- 90% Identity
- -
- 80% Identity
- -