Cmon009230.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- lrrfip2
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000021.1:66233356-66248881[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-102 7e-98 329.3 36.8 1 300 87 376 87 376 0.95 2 2 0.12 3.6e+03 -1.3 2.6 128 151 399 422 377 450 0.50
Sequence Information
- Coding Sequence
- ATGGAGGACGAAAGTTTAAAGACCGACGAAAATTCGGAAAATTGTGGCTACGCCCAGGAATTTTCACAGTTTGAAAGGTCTAGAACCGAGCCTTCGGAACCTGGTTACGAAGAGGCAGCTGCGTTGTCCGCTTCTAGCAGTCTAAACGACGATCTTGACGAGCTCGCGAATTCAGATTGCGAAAGTGAAATTTACAATTTGAGCGATGACAACAGTGATGACATCATTTCACATTTTATGGAAGTCGCCTGTGGTGAGGCTGAAGAGCGACTGCGCGCCAAAAGACAGGCCAGAGCAGAGGCGCGGGAAATCCGCATGAGAGAACTGGAGAAGCAGCAGAAGGAACAGGAAGAAAATGCGGATCGGCAGTTCGACATGTTGGCCGAGCCGATGGTCAGGACGACCAGAACCAGCGTCAACAGGTACATGTCGAGTAGGCGAAGTTCTGAGGATTCCTTGGAAGATAGTGGCAGCCTCAGAGAACTTAGGCATGAACTAAAAGAAGTAgaagacaaatttcgaaaagcTATGATAACCAATGCTCAACTTGACAACGAAAAATCCGCCCTTACTTACCAAATAGAACTACTTAAAGATAAATTGCAGGAATTAGAAGAGGAACAGTCACAATTAAAGAGGGAACATAGGGAGAAATGTAGAGAACATGATCAATTGAAAAGGTTATGTACTAAGCTCAAACGTGATCTGGAAGTGGCGCAAGCAGAACTGGACGAAAGGAATCAACTGATAAAAGAACATGGCTTAGTGATAGTGTGTGAAGAGGCCTCGGAGGAAAGCAATGGTGATATTAGTGTGAATAGTTTGGGTACTCCTAAAAAGTCAttagtgaaaatagaaaatgctCAGTTATTAGAAAATGGTGTTGGCACATTAGATATTAGATTGTCTAAATTCATGAAAGAGAAAAGAGATCTTGAAGATGAAATATGCCACTTGAAATTGGAATTGGAAGAAGAAAGAAGTAGGAAACGTAAATCACATTCTATTAGTAGTACCAATGGCCCTATGTCTGATTATGATATAGATAGCGATTTACAGAGAGATGGTAATAGCTTATTGGCAGATTACAAATTTAGGGCACAAAAAGCAGAACAAGATGTGGCAACACTTCAAGCTACAGTTGCCAGATTAGAAAGTCAGGTAGTTCGATATAAAGCCGCATCAGAGGCCTCTGAAAAATTAGAAGAAACACTTAAGTCTGAGAAACGAAAACTGCAGAGAGAAGCTCGCGATGCCATAAGTAGAGCTGAAGAATTAGAAACATCGAATCTCCATTTACTTAAGAGGTTGGATAAACTGAAGAACGCTAAATCTActttactgaaagagctttgA
- Protein Sequence
- MEDESLKTDENSENCGYAQEFSQFERSRTEPSEPGYEEAAALSASSSLNDDLDELANSDCESEIYNLSDDNSDDIISHFMEVACGEAEERLRAKRQARAEAREIRMRELEKQQKEQEENADRQFDMLAEPMVRTTRTSVNRYMSSRRSSEDSLEDSGSLRELRHELKEVEDKFRKAMITNAQLDNEKSALTYQIELLKDKLQELEEEQSQLKREHREKCREHDQLKRLCTKLKRDLEVAQAELDERNQLIKEHGLVIVCEEASEESNGDISVNSLGTPKKSLVKIENAQLLENGVGTLDIRLSKFMKEKRDLEDEICHLKLELEEERSRKRKSHSISSTNGPMSDYDIDSDLQRDGNSLLADYKFRAQKAEQDVATLQATVARLESQVVRYKAASEASEKLEETLKSEKRKLQREARDAISRAEELETSNLHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00646999;
- 90% Identity
- -
- 80% Identity
- -