Cmon052387.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000185.1:147227027-147227734[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-10 3.6e-08 34.7 0.1 2 39 10 47 9 50 0.94
Sequence Information
- Coding Sequence
- ATGCCTCCTAAGCGAGCATTGTGGTCACAAGATGATCTAGCCTCAGCTGTTCGCGCAGTACAGAGAGGAACTATGAGTACGTATGCGGCTGCAGTAAGATACAAAATTCCTAGAAGAACCATCAGAAATCATCTCCAGAGTGGTATTTTGATAAAAAGTTTGGGTCGTAAGCCTGTGTTAAGTCCCGAACAGGAAGCTGAtcttgtgaagagaataatcaGGTATGCAGAAATAAGTTTACCTGTCACTCCAAGAATACTACGACGGTTGGTGTATAAATATTGCGTGCTAAATAACATAAAACACAATTTTGATGAGACTGCGAAACGCGCTGGTAAAGATTGGTATAAGGCGTTTATGAAGAGACATCCTGAAATATCTCTAAGAAAAGCACAGTTCATGAACCCGGCCAGAGCCCAAAAACTTAATAAGTTTATTGTGGATGATcactttcaaaaactgaatgaagtttatgATAAACTGGACCTTAGAGATCACCCCGAAAGAATAAATAACATGGATGAGAAAGGATGCCGTTTAACGATTCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGAGCAAAGAGAGTTCATTTGCAGGCTTCTGAACACGCAGAAAGTGTTACTATTGCAGGATGTGTAAATGCACTTGGTACTGCCATACCGCCAATGGTtagattatattatataatagtaaaaaaggtttaa
- Protein Sequence
- MPPKRALWSQDDLASAVRAVQRGTMSTYAAAVRYKIPRRTIRNHLQSGILIKSLGRKPVLSPEQEADLVKRIIRYAEISLPVTPRILRRLVYKYCVLNNIKHNFDETAKRAGKDWYKAFMKRHPEISLRKAQFMNPARAQKLNKFIVDDHFQKLNEVYDKLDLRDHPERINNMDEKGCRLTIHHQQSVLAKKGAKRVHLQASEHAESVTIAGCVNALGTAIPPMVRLYYIIVKKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264461; iTF_00394290; iTF_00394297; iTF_00394298; iTF_00355069; iTF_00394301; iTF_00971164; iTF_00970338; iTF_00700960;
- 90% Identity
- iTF_00394290;
- 80% Identity
- -