Cmon015779.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000062.1:7350690-7351295[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-10 2.8e-08 35.0 0.1 2 39 10 47 9 50 0.94
Sequence Information
- Coding Sequence
- ATGCCTCCTAAGCGAGCATTGTGGTCACAAGATGATCTAGCCTCAGCTGTTCGCGCAGTACAGAGAGGAACTATGAGTACGTATGCGGCTGCAGTAAGATACAAAATTCCTAGAAGAACCATCAGAAATCATCTCCAGAGTGGTATTTTGATAAAAAGTTTGGGTCGTAAGCCTGTGTTAAGTCCCGAACAGGAAGCTGAtcttgtgaagagaataatcaGGTATGCAGAAATAAGTTTACCTGTCACTCCAAGAATACTACGACGGTTGGTGTATAAATATTGCGTGCTAAATAACATAAAACACAATTTTGATGAGACTGCGAAACGCGCTGGTAAAGATTGGTATAAGGCGTTTATGAAGAGACATCCTGAAATATCTCTAAGAAAAGCACAGTTCATGAACCCGGCCAGAGCCCAAAAACTTAATAAGTTTATTGTGGATGATcactttcaaaaactgaatgaagtttatgATAAACTGGACCTTAGAGATCACCCCGAAAGAATATATAACATGGATGAGAAAGGATGCCGTTTAACGATTCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGAGCAAAGAGAGCATTTGCAGGCTTCTGA
- Protein Sequence
- MPPKRALWSQDDLASAVRAVQRGTMSTYAAAVRYKIPRRTIRNHLQSGILIKSLGRKPVLSPEQEADLVKRIIRYAEISLPVTPRILRRLVYKYCVLNNIKHNFDETAKRAGKDWYKAFMKRHPEISLRKAQFMNPARAQKLNKFIVDDHFQKLNEVYDKLDLRDHPERIYNMDEKGCRLTIHHQQSVLAKKGAKRAFAGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394304;
- 90% Identity
- iTF_00394304; iTF_00394298; iTF_00394297; iTF_00394301;
- 80% Identity
- -