Murs015531.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- -
- Assembly
- GCA_003671415.1
- Location
- PDGT01000051.1:2717945-2718634[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-12 6.3e-09 35.8 0.1 1 39 9 47 9 52 0.94 2 2 5.7 4.9e+03 -2.3 0.0 17 23 126 132 124 132 0.85
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTGTGGTCAGAAGACGACCTGATTTCAGCTGTTCGAGCAGTACAAAGAGGTGCTATGAGTACGTATACGGCTGCAGAAAGATATAAAGTTCCTAGAAGAACAATCAGAAATCATCTGCAGTCTGGCAGTTTAAAGAAAACTTTGGGACGTAAACCTATATTGAATACTGAAGAGGAAGCTCAACTTGTGCAAAGGATAATCCGGTATTTTGAAATAGGCTTGCTTGTAACACCAAGAATACTGCGTCGATTGGTGTATAAATATTGTGAGCAAAATAAGGTAAAGcacaattttaatgatattggCAAATGCGCAGGTAAAGACTGGTTTAAAGCGTTCATGAAAAGACACCCTGAAGTATCTGTCAGAAAAGCTCAGTTTATGAACCCAGGAAGAGCccaaaaacttaataaatttattgttgacGACCACTtccaaaaattgaaaattatttatgataaattcgAATTATATGATCATCCTGAACGAATATATAACATGGAGGAGAAAGGTTGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGGGCTAAAAGGGTTCATTTGCAGTCTTCCGAACATGCAGAAAGCGTTACGATTGCAGGATGTTTTAATGCTCTCGGTACTGCAATACCATCTATGGTCATATTTAAGGGCTAA
- Protein Sequence
- MPPKRALWSEDDLISAVRAVQRGAMSTYTAAERYKVPRRTIRNHLQSGSLKKTLGRKPILNTEEEAQLVQRIIRYFEIGLLVTPRILRRLVYKYCEQNKVKHNFNDIGKCAGKDWFKAFMKRHPEVSVRKAQFMNPGRAQKLNKFIVDDHFQKLKIIYDKFELYDHPERIYNMEEKGCRLTIHHQQSVLAKKGAKRVHLQSSEHAESVTIAGCFNALGTAIPSMVIFKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394304;
- 90% Identity
- iTF_00971164;
- 80% Identity
- iTF_00971164;