Cpri015641.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- retn
- Assembly
- GCA_963576515.1
- Location
- OY754950.1:3157086-3165423[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-20 2.2e-16 60.2 0.0 17 89 37 107 19 107 0.92 2 2 4.1 9.4e+03 -2.7 0.0 25 38 244 257 205 261 0.61
Sequence Information
- Coding Sequence
- ATGTTGAATTTCATAAGGCTAAATTATGCAGCTAGAAATCGAGACAGAAACGGATTTACTAAATGCCACGACGTTTCACACGACATTTCTCCTAACGACAAGCGCCTACGTACCCCCATAAATCGGTTGCCGATAATGGCCAAATCCGTTCTCGATCTCTACGAACTGTACAACTTGGTGATAGCCAGAGGTGGCCTGGTAGATGTGATAAACAAGAAGCTGTGGCAGGAGATCATCAAAGGTCTGCATTTACCGTCGTCGATCACTTCCGCCGCTTTCACCCTTAGGACGCAATACATGAAGTACCTCTACCCGTACGAGTGCGAGAAACGCCGCCTGAGCACCCCTGCCGAGCTGCAAGCCGCCATTGACGGGAACAGGAGGGAGGGCAGACGCAGCAGCTACGGCCAGTACGATTCCATGCAGCGCTCCCCCAATTCCAGCATACAGATGTCCCCCCTATCGTTAGTCTCCCAACAGCAACACCAACAGCTTGCCGCACGCATGATGGGCAGCGGCATCAACCTCCATAACGGAGCTCATCATCCTAGTCACCCCCAGCCGTTGGGGCAACCAATCAATGGGGGACCCCTGCCAGGTCTGGCGCCTAGCGAGTTCGAGGCTCGCATGATGGAGTACGTGAAGCTCCTCAACAAGGAGATAAGTTCCGCCGCGACTCCCCCGCGACAAGGGGACATCTCCCCGCCGAGCACCACTTCCCCCCTCAACCAATTGGAAATGTCACGTATGGCGTTGTGGAACCTGTACAACAACAACCAATCACCTGTCGAACCCCAAAAGGAACCGATCAATCTCTCAGAGCCGACGATGATTTCTAAAAGGGAACCCGAGTGCAGAGAGTCGCCGCCTCCTCCCAAAAGGATGCCCAAGGAGGAGGAACCCGAACCGGAACCCCATAAGCCCATCTCGCCTTCCACGCATATTAAGATTAATACCAGAGGTGATTCCCGCAACGGCGAAAATTCCCTAGTAGTTAGTATGGAACTAAACGGTGTGACATATCAAGGTGTCCTTTTTGCGCAAAACTCTCCCCACAGTAACCGAACGGCGCTGGCATCTTAA
- Protein Sequence
- MLNFIRLNYAARNRDRNGFTKCHDVSHDISPNDKRLRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMQRSPNSSIQMSPLSLVSQQQHQQLAARMMGSGINLHNGAHHPSHPQPLGQPINGGPLPGLAPSEFEARMMEYVKLLNKEISSAATPPRQGDISPPSTTSPLNQLEMSRMALWNLYNNNQSPVEPQKEPINLSEPTMISKREPECRESPPPPKRMPKEEEPEPEPHKPISPSTHIKINTRGDSRNGENSLVVSMELNGVTYQGVLFAQNSPHSNRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_01289533;
- 80% Identity
- -