Celi016676.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- -
- Assembly
- GCA_907269065.1
- Location
- OU026078.1:9793100-9796997[-]
Transcription Factor Domain
- TF Family
- zf-LITAF-like
- Domain
- zf-LITAF-like domain
- PFAM
- PF10601
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-27 1.9e-23 83.0 5.3 2 69 30 98 29 99 0.91
Sequence Information
- Coding Sequence
- ATGGTGGAAACAAACGTGTATCAGCAAATAGCGCAAAGCACAGAGAGCACAGTATGCATCGAAATGGACCTACTGAAAGTTGGCTCGGAGCCAGTCGGCATGCGCTGCCCGTACTGCCAGGAGGACATGATGACCAGAGCAAGCTATAGAGCCACCACCCTCACGCATATTATCGCTGCTGTTTTGGGTATTCTATTCTGGTGGCTATGTTGCTGTATAATCCCATACATAACTAGAAGGTGGAAAAACGTGGAGCATTACTGTCCCAACTGTAGTAAATTTTTGGGTGTTTACTCGAGAAGTTCTATAATTTAA
- Protein Sequence
- MVETNVYQQIAQSTESTVCIEMDLLKVGSEPVGMRCPYCQEDMMTRASYRATTLTHIIAAVLGILFWWLCCCIIPYITRRWKNVEHYCPNCSKFLGVYSRSSII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00033487; iTF_00667041; iTF_00635076; iTF_00206662; iTF_00818822; iTF_00827660; iTF_00034383; iTF_00207512; iTF_00826491; iTF_00896448; iTF_00927171; iTF_00045052; iTF_00056209; iTF_00143563; iTF_00650558; iTF_00125586;
- 90% Identity
- -
- 80% Identity
- -