Caur004913.1
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- nfxl1
- Assembly
- GCA_949320105.2
- Location
- OX439472.1:51594025-51600831[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4e+04 -7.8 5.6 15 19 161 165 160 165 0.81 2 19 0.12 2.4e+03 -0.2 0.4 4 10 196 202 195 202 0.95 3 19 8.4e-08 0.0017 19.5 16.7 1 19 210 227 210 227 0.99 4 19 0.89 1.8e+04 -3.0 0.5 6 10 253 257 252 257 0.88 5 19 2.8e-08 0.00057 21.0 14.9 1 19 263 281 263 281 0.99 6 19 1.4 2.7e+04 -3.6 1.0 6 10 306 310 305 310 0.88 7 19 1.1e-10 2.2e-06 28.7 9.9 1 18 316 333 316 334 0.97 8 19 0.42 8.5e+03 -2.0 1.5 5 10 358 363 358 363 0.94 9 19 2.9e-06 0.059 14.5 8.8 1 18 369 386 369 387 0.97 10 19 0.098 2e+03 0.1 0.9 1 5 396 400 396 405 0.90 11 19 0.0056 1.1e+02 4.1 15.7 1 18 421 438 421 439 0.94 12 19 8.8e-11 1.8e-06 29.0 13.1 1 18 448 465 448 466 0.97 13 19 0.00016 3.2 9.0 6.1 9 19 514 524 512 524 0.88 14 19 0.28 5.6e+03 -1.4 5.6 4 12 535 543 530 543 0.82 15 19 2 4e+04 -6.9 4.5 14 18 571 575 571 575 0.86 16 19 2 4e+04 -4.4 1.4 6 10 602 606 601 606 0.58 17 19 5.1e-05 1 10.6 7.0 1 12 612 623 612 623 0.96 18 19 3.7e-06 0.074 14.2 19.4 3 19 653 669 652 669 0.92 19 19 1.3e-06 0.027 15.6 13.5 1 18 712 731 712 732 0.86
Sequence Information
- Coding Sequence
- ATGCACAGTCAACCTAAACCTAAAAACCCatggaataaaaatatacaaaatcaaccaaaaaagaaaaatgttaaaatctcaCCAACTCCTTCTGAAGTTAAATTCAAAGAAGCTCACGCAAAACTACAGGCTTCGGTTCAGAAACATGTAAAGGATTACGAATCTTCATCAGATGAAGAAGAATTAGAATCTGACACCCTATTAGattctattttaaataattaccgaaaaaataaTGGTGAAGATGAAAgcattgaaaaaactgaaaacttGCTGAAAGAAACATTTCTTTCTGGTGCTGCAACATGCTTAATATGCATTTCAAGAATTAGAAAAGATGACCAGatatgGTCATGTATCAATTGCTATGGACATTTTCATTTAATGTGTGTACAAAGGTGGTCAAAAGATACTATAACACAACAGAAACATGCTCTCCAAGAGCAAATAGTTGTGAAACAAGCAAAATTCTTTTGGTGCTGTCCAAAATGTCGCCATGAATATGACACAGCTGATGTGCctacaaaatatttatgtttttgtacTAAAACTGAAAATCCAAAATATGATCCATTCCTTGTTCCCCACTCTTGTGGTCAAATCTGTAGAAAGGATTTGAAACCATTTTGTGGTCACAGTTGTTTGCTACTTTGTCATCCagGTCCATGCCCCCCTTGTCCTGTTACCATTAGCATCACATGCTACTGTGGTGCGCAGCCCCCAAGAGTTCAGAGGTGCAGCAAAAAAGAATGGTCTTGTAACAGTGTTTGTGGTAAACAGTTAGTATGTGGCAAACACGCTTGCCCAAATACCTGCCACCTTGGTGATTGCAAACCATGTCCAAAGAAAAGTATCCAAAAGTGCGTTTGTGGAGCTCAACAAAAACTTAGAGATTGTGCCCATCCTGTATGGCAGTGTGATAAGGTTTGTAATAAGCAGCTTGATTGTGGAAACCACAAATGTGAAGAAGTATGTCATGACGGAGTATGTGATAGTTGCCTTTTAAGTAAACCTAGAACTTGTCCCTGTGGGAAAACTAATTATCGCCTTCCGTGTACTCAGGAGACACCTACTTGTCAGGACACATGTGAAAAACTACTAGATTGCGGCATTCATTCATGCAATCTAAGATGTCACAAAGATAAATGTGGAgtgtgtCTTGAAACTGTAGAAAAATCTTGTAGATGTGGTCAACATACCAAAGAAGTTCAATGTTACAAACCTTACCTATGTGAAGTCAAATGCAAAAGAATGAAAGATTGTAATAAGCATCCTTGCAATAGAAAGTGCTGCGATGATAATTGTCCACCTTGTGAAAAACCCTGTGGAAGGACCCTTAACTGTGGTAATCACAAATGTAACTCGGTCTGTCATCGAGGACCTTGTTATCCTTGTAACGAAACTGAGGATGTTTCTTGTAGATGTGGAGCAACCCAAATCGCAGTACCTTGTGGACGTAAAAGCAAAACCAAACCTCCGAAATGCAGCGTTTTATGTTCgaACCTGCCTGATTGCCATCACGAAAAACGGATTGAACACAGATGCCATTTCGGTGACTGTCCTCCTTGCAAGCAAATCTGCAATAAGATACACAAGTGTTATCACGTGTGTCCGGTGATCTGTCATTCTGCAGTAATGGTAAAAATCGAGGGTCAAAAAGCTTCTATGCCTTGGGAACAAGTTAAACCTCAAGTTGTGAGGCGGGAGTTGCCTTGTCCAGATTGTGTGATTAAAGTTCCCGTTACTTGTTTGGGTGAACATGAAACATCCGATTGGCCCTGTTACATTGCAAAACCGTCCAGTTGTCACAGGCCATGTGGAAGAGTACTAGAATGCGGTAACCACACTTGCACCTTATCTTGTCACACAGTTGCAAATGCTAATGACAATATTGGGGCGGGATCAAATTGCGAAAAATGTGAAGGTAGTTGCACCAAAGATAGACCTGACGGATGCACTCATGCATGTCCAAAGCCCTGTCATCCAGGCCCTTGTCCACCATGCAAAGTAATGATTAGAATAAAATGTTATTGTGGTCTTAATCAACCTTACGTGATGTGTTCTCATTGGCTTAACGAAGAAAAAAGAGAAACCCTACAGACTTGTGGTAACCAGTGTCCAAAAAACTATGAATGCGGTCACAGATGCAAATCAAACTGCCATCCTGGACCATGTCCGAACGCAGACCAATGCAAGAAGAAAGTCAAAGTTCCCTGCAAGTGCAAGAGGATTAGAAAGGAATTCTCTTGCGAAACTATCCGCAAAAACATGGCGGTAGTGGAATGTGACGACATCTGCGAATTAAAGAATGCAGAAACTAGGAAAATCAGGGAAGCAGCCGAAGAGCTGAAAAAGAAGGAAGAAGAAATAAGGAATAAAAAGGAGCTAGAGAAATACCAAAAAATGTTTGAGGGAAAGAAAAAGAACAGAGATAGAAGGAGGTACGAAGACGAGGTTGAAGATGGTTTTATAAAGAGGCATTGGGTGATTTTAGTTGCCATATTGGTAATTGTTGTCTCATTGGGGGGATATTTTGTAGGTGGAAAAATCTAA
- Protein Sequence
- MHSQPKPKNPWNKNIQNQPKKKNVKISPTPSEVKFKEAHAKLQASVQKHVKDYESSSDEEELESDTLLDSILNNYRKNNGEDESIEKTENLLKETFLSGAATCLICISRIRKDDQIWSCINCYGHFHLMCVQRWSKDTITQQKHALQEQIVVKQAKFFWCCPKCRHEYDTADVPTKYLCFCTKTENPKYDPFLVPHSCGQICRKDLKPFCGHSCLLLCHPGPCPPCPVTISITCYCGAQPPRVQRCSKKEWSCNSVCGKQLVCGKHACPNTCHLGDCKPCPKKSIQKCVCGAQQKLRDCAHPVWQCDKVCNKQLDCGNHKCEEVCHDGVCDSCLLSKPRTCPCGKTNYRLPCTQETPTCQDTCEKLLDCGIHSCNLRCHKDKCGVCLETVEKSCRCGQHTKEVQCYKPYLCEVKCKRMKDCNKHPCNRKCCDDNCPPCEKPCGRTLNCGNHKCNSVCHRGPCYPCNETEDVSCRCGATQIAVPCGRKSKTKPPKCSVLCSNLPDCHHEKRIEHRCHFGDCPPCKQICNKIHKCYHVCPVICHSAVMVKIEGQKASMPWEQVKPQVVRRELPCPDCVIKVPVTCLGEHETSDWPCYIAKPSSCHRPCGRVLECGNHTCTLSCHTVANANDNIGAGSNCEKCEGSCTKDRPDGCTHACPKPCHPGPCPPCKVMIRIKCYCGLNQPYVMCSHWLNEEKRETLQTCGNQCPKNYECGHRCKSNCHPGPCPNADQCKKKVKVPCKCKRIRKEFSCETIRKNMAVVECDDICELKNAETRKIREAAEELKKKEEEIRNKKELEKYQKMFEGKKKNRDRRRYEDEVEDGFIKRHWVILVAILVIVVSLGGYFVGGKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00057606; iTF_00792665; iTF_01047937;
- 90% Identity
- -
- 80% Identity
- -