Avir006382.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Altica viridicyanea
Gene Symbol
NFXL1
Assembly
None
Location
GWHAMMQ00000224:746052-751387[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 1.8e+04 -7.8 5.6 15 19 160 164 159 164 0.81
2 18 0.12 1.1e+03 -0.2 0.4 4 10 195 201 194 201 0.95
3 18 1.8e-07 0.0016 18.4 15.4 1 19 209 226 209 226 0.99
4 18 2.9e-09 2.6e-05 24.1 16.7 1 19 262 280 262 280 0.99
5 18 1.6e-09 1.4e-05 25.0 10.9 1 19 315 333 315 333 0.99
6 18 1.3 1.1e+04 -3.5 1.0 5 10 357 362 357 362 0.86
7 18 2.8e-06 0.025 14.6 10.0 1 18 368 385 368 386 0.97
8 18 0.12 1.1e+03 -0.3 0.9 1 5 395 399 395 399 0.96
9 18 5.5e-05 0.49 10.5 17.1 1 18 420 437 420 438 0.94
10 18 8.8e-11 7.8e-07 29.0 13.1 1 18 447 464 447 465 0.97
11 18 9.8e-05 0.87 9.7 6.4 8 19 512 523 511 523 0.88
12 18 0.0075 67 3.6 4.1 1 12 532 542 532 542 0.90
13 18 2 1.8e+04 -4.3 2.7 14 18 570 574 570 575 0.85
14 18 0.0037 33 4.6 3.2 1 12 611 622 605 622 0.83
15 18 2 1.8e+04 -4.4 1.6 5 10 638 643 638 643 0.89
16 18 1.2e-06 0.011 15.8 20.0 3 19 652 668 651 668 0.94
17 18 1.7e-05 0.15 12.1 12.3 1 17 711 729 711 731 0.86
18 18 1.6 1.5e+04 -3.8 0.7 6 10 761 765 760 765 0.87

Sequence Information

Coding Sequence
ATGCACAGTCAACCAAAGCCGAAAAACCCGTGGAACAAAAATATCAATCAACCAAAAAAGAGTCGTGACAAAAATTTACCAACTCCATCAGAAGTAAAATTTAAAGAAGCACATGCAAAACTACAAGCTGCTGTACAGAAGCATGTAAAGGAATATGAATCTTCTTCAGAAGAAGAGGAATTAGAATCGGATCTTTTAATAGATTCGATATTAAAAAATTACAAAAGCAATAATAGTGAGGATAATAATATTGTGAGAACCCAAAGTTTACTTAAAGAAACATTTCTATCTGGAACAACTACTTGTTTAATATGTATCTCAAGGGTTAAGAAAGATGATCAGATTTGGTCTTGTGTTAACTGTTATGGTCAATTCCATCTAATGTGTGTACAAAGATGGTCAAAAGATACTATAACCCAACAAAAACACGCACTTCAAGAACAAATAGTAGTAAAACAAGCCAATTTTTTTTGGTGTTGCCCTAAATGTCGTAATGAATATGACACCAACGATGTTCCTTCTAAATATTTATGTTTTTGTCGCAAAACAGAAAATCCAAAATACGATCCATTTTTAGCACCGCATTCCTGTGGTCAGATTTGTAAGAAAAACTTGAAACCACTTTGTGGTCATTCTTGTTTGTTACTATGTCATCCAGGTTCTTGTCCACCATGTCCAGTAACTGTAAGCATATCTTGTTACTGTGGTTCTCAATCTCCAAGAACTCAAAGATGTAGTAAAAAGGAGTGGTCTTGTAATAGTATTTGTGGTAAGGCATTAGAATGTGGAAAACATACTTGTCCAGATCCTTGTCATGCAGGTGATTGTAAACCATGTCCAAAGAAAAGTATTCAAAAATGTGTATGTAAATCCCAACAGAAACTTAGGGATTGTGCTAGTCCTGTGTGGTTATGTGACAAGGTATGTAACAAACCGTTGGATTGTGGTAATCATAGATGTGAAGAAGTGTGTCATATAGGTGTTTGTGATAGTTGTCCATTATCAAAACCACGTACTTGTCCATGCGGAAAAACAGCATTTCAGTTACCTTGTACTCAAGAAACTCCAACATGTCCAGATACATGCGATAAATTATTAGATTGTGGATTTCATACATGTAATCAAAGATGTCACAAAGAAAAATGTGGAGTGTGCTTGGAAACTGTAGAAAAATCTTGTAGATGTGGTCAACATACCAAAGAGATTCAATGTTTCAAACCTTATCTTTGTGAAGTTAAATGTAAGAGAATGAAGGATTGTAATAAGCATCCGTGTAATAGGAAGTGTTGCGATGGTAATTGTCCTCCTTGTGAAAAACCCTGTGGACGTACATTAAAATGCGGTAATCACAAATGTAATTCAGTTTGTCATAGAGGACCATGCTATCCTTGTAATCAAACCGAAGAAGTTTCTTGTAGATGTGGCGCTACCAAAATTTCAGTGCCTTGTGGTCGTAGAAATAAAACTAAACCACCAAAATGTTCAGTTCCTTGCTCAATTCCACCAGATTGTCACCATCCGACCCGAATCGAACATAAATGCCATTTTGGTGATTGTCCTCCATGTAAACAGATTTGTGATAAAATTCTCAACTGTTCTCACTCTTGTCCTTCCTTTTGTCATTCAGCTGTACTTGTAAAAATTGAAGGACAAAAAGCTTCCATGCCTTGGGAACAAGTTAAACCTCAGGTTGTTAGAACTGAATTACCTTGTCCTGATTGTTTATATAAAGTTCCTGTTACATGTCTGGGTGAACATGAAACCTGTGACTGGCCTTGTTATATTGCTAAACCGTCCAGTTGTCATAGACCTTGTGGAAGATTGTTAGATTGTGATAATCACATTTGTAGTTTACCATGTCATAAAGTTGAAAATGCAACAGATAAAATTAAGGCTGGATCGAATTGTGAAAAATGTGAGGAAAATTGTACGAAAGACCGTCCAGAAAATTGTAATCATGAGTGCCCTAAACCTTGTCATCCAGGTCCTTGTCCTCCATGTAAAGTAATGATTAGAATAAAATGTTATTGTAATTTGAATCAACTTTATGTGACGTGTGATGATTGGTTAAATGAAGAAAAGAAAGTGGAATTGCAAACTTGTGGAAATCAATGTCCAAAAAATTACGAATGTGGCCACAGATGCAAATCAAACTGCCATGCAGGTTTATGTCCAAATCCCGAACAATGTAAGAAAAAAGTAAAAATCTCTTGCAAATGTAAAAGAATAAAAAAAGAATTTTCCTGCGAAGCTGTTCGTAAAAATGAAGCTGTAGTGGAATGTGATGAAATATGCGCTAGTAAAAAAGAAGAAGCGAAAAAATTACGCGATCTAATCGAAGAACAGAAAAGAAAAGATGAAGAAATAAAAAACCAAAGAGAATTGGAGAAATACCAAAAAATGTTTGAAGGTAAAAAGAAAAATCGAGAAAGAAAAAGATATGAAGATGAGGTTGAAGTTAGTTTTTTAAGGAAATATTGGTTAGTTATTGTTTCTGTATTAGTTTTTATTATATCGGTTTTGTGTTATAAACTATTTTTTTAG
Protein Sequence
MHSQPKPKNPWNKNINQPKKSRDKNLPTPSEVKFKEAHAKLQAAVQKHVKEYESSSEEEELESDLLIDSILKNYKSNNSEDNNIVRTQSLLKETFLSGTTTCLICISRVKKDDQIWSCVNCYGQFHLMCVQRWSKDTITQQKHALQEQIVVKQANFFWCCPKCRNEYDTNDVPSKYLCFCRKTENPKYDPFLAPHSCGQICKKNLKPLCGHSCLLLCHPGSCPPCPVTVSISCYCGSQSPRTQRCSKKEWSCNSICGKALECGKHTCPDPCHAGDCKPCPKKSIQKCVCKSQQKLRDCASPVWLCDKVCNKPLDCGNHRCEEVCHIGVCDSCPLSKPRTCPCGKTAFQLPCTQETPTCPDTCDKLLDCGFHTCNQRCHKEKCGVCLETVEKSCRCGQHTKEIQCFKPYLCEVKCKRMKDCNKHPCNRKCCDGNCPPCEKPCGRTLKCGNHKCNSVCHRGPCYPCNQTEEVSCRCGATKISVPCGRRNKTKPPKCSVPCSIPPDCHHPTRIEHKCHFGDCPPCKQICDKILNCSHSCPSFCHSAVLVKIEGQKASMPWEQVKPQVVRTELPCPDCLYKVPVTCLGEHETCDWPCYIAKPSSCHRPCGRLLDCDNHICSLPCHKVENATDKIKAGSNCEKCEENCTKDRPENCNHECPKPCHPGPCPPCKVMIRIKCYCNLNQLYVTCDDWLNEEKKVELQTCGNQCPKNYECGHRCKSNCHAGLCPNPEQCKKKVKISCKCKRIKKEFSCEAVRKNEAVVECDEICASKKEEAKKLRDLIEEQKRKDEEIKNQRELEKYQKMFEGKKKNRERKRYEDEVEVSFLRKYWLVIVSVLVFIISVLCYKLFF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00387742;
90% Identity
-
80% Identity
-