Ntra022560.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Neocrepidodera transversa
Gene Symbol
NFXL1
Assembly
GCA_963243735.1
Location
OY725343.1:12687189-12695739[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 5.2e+04 -7.8 5.6 15 19 161 165 160 165 0.81
2 20 0.12 3.2e+03 -0.2 0.4 4 10 196 202 195 202 0.95
3 20 1.8e-08 0.00047 21.6 16.9 1 19 210 227 210 227 0.99
4 20 1.1 2.9e+04 -3.3 0.5 6 10 253 257 252 257 0.88
5 20 4.3e-07 0.011 17.2 16.5 1 19 263 281 263 281 0.99
6 20 0.43 1.1e+04 -2.0 1.4 5 10 305 310 299 310 0.75
7 20 1e-10 2.7e-06 28.8 11.7 1 19 316 334 316 334 0.99
8 20 1.3 3.3e+04 -3.5 1.0 5 10 358 363 358 363 0.86
9 20 6e-06 0.16 13.5 9.5 1 18 369 386 369 387 0.97
10 20 0.098 2.6e+03 0.1 0.9 1 5 396 400 396 405 0.90
11 20 0.00012 3 9.4 16.5 1 18 421 438 421 439 0.94
12 20 1.1e-09 2.8e-05 25.5 11.8 1 18 448 465 448 466 0.97
13 20 0.00016 4.1 9.0 6.1 9 19 514 524 512 524 0.88
14 20 0.07 1.8e+03 0.5 3.8 4 12 536 544 534 544 0.86
15 20 2 5.2e+04 -4.7 2.9 14 18 572 576 572 577 0.86
16 20 1.7 4.5e+04 -3.9 0.1 9 12 602 605 601 606 0.73
17 20 4.4e-06 0.11 14.0 5.7 1 12 613 624 613 624 0.96
18 20 2 5.2e+04 -5.4 2.2 11 15 641 645 638 646 0.56
19 20 3.2e-05 0.84 11.2 16.7 4 19 655 670 653 670 0.91
20 20 2.6e-06 0.069 14.7 12.2 1 18 713 732 713 733 0.86

Sequence Information

Coding Sequence
ATGCACGCTCAACCAAAGCCAAAAAACCCTTGgactaaaaatgttcaaaaccaacagaaaaaaaaacgtgatAAACCTTCACCAACTCCGTCTgaagtaaaatttaaagaagCACATGCAAAGCTCCAGGCTTCTGTTCAAAAACATGTTAAAGAGTATGAATCTTCATCAGAAGAAGAAGAATTAGAATCGAACACTTTAATAgactcaattttaaaaatctattgtaaaaataatggagaagatgaaaatgttgaaaaaactCAAAACTTTCTTAAGGAATCATTTCTTTCTGGTACAGCAACATGTTTAATTTGTATTTCAAGAATTAGAAAAGATGATCAGATATGGTCGTGTTGCAATTGTTATGGACATTTCCATCTTATGTGTGTACAAAGATGGTCAAAAGACACTATTACTCAACAGAAGCATGCTCTCCAAGAACAGATAGTAATGAAACAAGCAAAATTATCTTGGTGCTGCCCAAAATGTCGTCATGAATATGATACAACAGATGTTCCAATAAAGTATTTATGTTTCTGTACTAAAActgaaaatccaaaaaatgatCCATTTCTTGCTCCACATTCCTGTGgtcaaatatgtagaaaaaatttaaaaccaatcTGTGGTCATACATGTTTGCTGCTTTGTCATCcagGGCCATGTCCTCCTTGTCCAGTTACTATTAGTATAACCTGCTTCTGTGGCTTTCAACCACCAAGAACTCAGAGATGTAGCAAAAAAGAATGGTCTTGTAACAATGTTTGTGGCAAACAATTAGAATGTGGCAAACATACATGTCCTAATCCATGTCATCCTGGAGTTTGTAATGCTTGTCCTAAGAAGAGCATCCAAAAATGCATTTGCAAAGCTCAACAGATACTTAGAGATTGTGCCAATCATGTATGGAAATGTGATAaggTTTGTAATAAACAACTTGATTGTGGAAATCACAAATGTGAAGAAGTATGTCATGATGGTATTTGTGATAGTTGTCCTTTAACAAAACCTAGAACTTGTCCATGTGGCAAAACTACGTACAACCTACCATGTATTCAAGAAACACCTACTTGTCCAGACACATGTGAGAAACTTTTAGACTGTGGCATGCACCTATGTAATAAAAGATGTCACAAAGAAAACTGTGGAGTGtgtCTTGAAACTGTTGAAAAATCTTGCAGATGTGGTCAACATACCAAAGAAGTTCAATGTTACAAACCTTACCTATGTGAAGTCAAATGTAAAAGACTGAAGGACTGTAACAAGCATCCATGCAATagaaagTGTTGCGATGGCAGTTGTCAACCCTGTGAAAAACCATGTGGACGGACACTTAATTGCAGTAATCATAAATGTACCTCAGTTTGTCATAGAGGACCTTGTTATCCATGTAATGAAACTGATGTGGTATCTTGTAGATGTGGAGCAACGAAAATATCTGTGCCTTGCGGACGTAAGAGTAAAACTAAACCTCCGAAATGTGGCTATTTATGTTTaatACCACCAGATTGTCATCACGATAATAGAATTGAACATAGATGCCATTTTGGTGACTGTCCTCCATGCAAACAAATTTGCAATAAGGTACACAATAAATGTGCTCATGTGTGTCCCGCAATGTGTCATTCTGCAATTCTAGTAAAAATAGAGGGACAAAAGGCTTCCATGCCTTGGGAACAAGTTAAGCCTCAGGTTGTGAGGCAAGATTTGCCTTGTCCAGATTGTATGGTTAAAGTTCCTGTTACATGTTTGGGTGAACATGAAACATCTGGTTGGCCCTGTCACATAGCAAAACCTTCTAGTTGTCACAGACAATGTGGACGGATACTAGAATGTGGAAATCACACTTGCAGCTTACTTTGCCACACAGTTCAGAATGCCGAggataaaattaaagcTGGATCTAATTGTGAAAAATGTGAAGGTAGTTGCGACAAAGATCGTCCTGAAGGATGTACTCATATATGTCCGAAACCATGTCATCCAGGTCTGTGTCCTCCTTGCAAAGTTATGATCAGAATCAAATGTTATTGTGGTCTTAACCAACCTTATGCTGCATGTGCTGAATGGCTTGATGAAGAAAAGAAAGCGGCCTTGCAAACTTGTGGTAATCAATGTCCAAAGAATtataaatgtGGTCACAGATGCAAATCCAACTGCCATCCAGGAGCTTGTCCAAACGCGGACCAATgcaagaaaaaagttaaaattcaaTGCAAGTGTAAAAGGATCAAAAAGGAATTTTCTTGTGAAACTGTTCGTAAAAATATGGGCGTAGTAGATTGTGATGAAATCTGTAAAGTGAAGAAAGAAGAAACTAGAAGAATTAGAGAGGCTGCCGAAGAGCAAAAGAAAAtggaagaagaaattaaaaatcaaaaagaattagaaaagtaccaaaaaatatttgaagggAAGAAAAAGGGTagggataaaaaaatatatgaagaagAGGTTGAAGTtggtttcattaaaaaatatcgggTGATTTTTATTGCTATGTTGGTAGCTGTTATTTCAGTAGGGGGGTATTTAgtaagtcaaaaaaataattaa
Protein Sequence
MHAQPKPKNPWTKNVQNQQKKKRDKPSPTPSEVKFKEAHAKLQASVQKHVKEYESSSEEEELESNTLIDSILKIYCKNNGEDENVEKTQNFLKESFLSGTATCLICISRIRKDDQIWSCCNCYGHFHLMCVQRWSKDTITQQKHALQEQIVMKQAKLSWCCPKCRHEYDTTDVPIKYLCFCTKTENPKNDPFLAPHSCGQICRKNLKPICGHTCLLLCHPGPCPPCPVTISITCFCGFQPPRTQRCSKKEWSCNNVCGKQLECGKHTCPNPCHPGVCNACPKKSIQKCICKAQQILRDCANHVWKCDKVCNKQLDCGNHKCEEVCHDGICDSCPLTKPRTCPCGKTTYNLPCIQETPTCPDTCEKLLDCGMHLCNKRCHKENCGVCLETVEKSCRCGQHTKEVQCYKPYLCEVKCKRLKDCNKHPCNRKCCDGSCQPCEKPCGRTLNCSNHKCTSVCHRGPCYPCNETDVVSCRCGATKISVPCGRKSKTKPPKCGYLCLIPPDCHHDNRIEHRCHFGDCPPCKQICNKVHNKCAHVCPAMCHSAILVKIEGQKASMPWEQVKPQVVRQDLPCPDCMVKVPVTCLGEHETSGWPCHIAKPSSCHRQCGRILECGNHTCSLLCHTVQNAEDKIKAGSNCEKCEGSCDKDRPEGCTHICPKPCHPGLCPPCKVMIRIKCYCGLNQPYAACAEWLDEEKKAALQTCGNQCPKNYKCGHRCKSNCHPGACPNADQCKKKVKIQCKCKRIKKEFSCETVRKNMGVVDCDEICKVKKEETRRIREAAEEQKKMEEEIKNQKELEKYQKIFEGKKKGRDKKIYEEEVEVGFIKKYRVIFIAMLVAVISVGGYLVSQKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00387742;
90% Identity
-
80% Identity
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