Clev029952.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- bab1
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000602.1:253208-277510[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-17 2.3e-14 53.7 0.0 1 43 61 104 61 106 0.95 2 2 8.4 4.9e+03 -1.8 1.4 6 15 184 193 182 196 0.88
Sequence Information
- Coding Sequence
- ATGGAGACGGATGCCAAGTTGTTGGAGTCGTCCCACGCTTGGCTCGGCGCCTCCACCTCCAGTATAGCAGCAGACAGCTACCAGTACCAACTGCAATCCATGTGGCAGAAGTGCTGGAATACCAACCAGAGCCTGGTGCACAATCTGCGCTTCCGGGAACGTGGACCCCTCAAGTCCTGGCGGCCTGAGACCATGGCGGAGGCGATCTTCAGCGTACTAAAGGAAGGGCTTTCCCTCAGCCAAGCGGCAAGGAAATACGATATCCCCTACCCGACGTTCGTCCTGTACGCGAATCGAGTGCACAACATGCTGGGTCCTAGCGCCGACGGTGGAGCTGATCTGCGCCCGAAGGGACGAGGACGACCGCAAAGGATCCTGCTGGGCGTCTGGCCGGACGAGCACATCCGCGGCGTGATTCGTGCGGTGGTATTCCGCGACGGGCACTCGCCCCACATCGTCAAGGAGGAGCCGACCACTATGTACCCCAGCCTGGCAAACTACGCGGCTTGCAACGGCCCGGAAGGCGCGGTTAGCCCGGGTGCGGCAGCCGCGGCTGCGGTCGCGGCGGTCGCTCAAGGTCTACGACATCAGATGTGCAGCATGGTGGCAGCGGCGCACTCGCAACAGCACGACATGATGGCGACGAATCTGTCGACGAACCTGTCGACGAGCCTGTCCTCCAGTCTGCAGGCGGCGATGCAAGCCAGCCAGCAtcataacaacaacaacacgAGCAGCAACGCGAGCGGCGGTGGCCTCGGCAGTAGCAACAGTGGTAACAACGGCAATTCCCCGTTGAATCTCGGCCTGGCGAGTCCGGGCTCGGGCGGACCGCCCGAGAGCCCGTTGGAGAGTCCCCTGGCAAGCCCATTGGGTCCACTGATGGACCCGACGGGCCACATACCTAGTAGCGTGGAGGTCGGCATCGGCGTGAGCGGCATGACGTACAAGCCGGCACGAAGCTTCGTCAGTCCGCGCCCGGAGACTCTCTTCCAGGAGGACATCGCCGATCTGGTGAAGAGTCCCCACGGTCTCAAAGACAAGGACAAGATCCCGGTGAAGCTCGAGCCGCTCACGGACTCACGCTGTGAATAG
- Protein Sequence
- METDAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTSLSSSLQAAMQASQHHNNNNTSSNASGGGLGSSNSGNNGNSPLNLGLASPGSGGPPESPLESPLASPLGPLMDPTGHIPSSVEVGIGVSGMTYKPARSFVSPRPETLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_01261764;
- 80% Identity
- -