Basic Information

Insect: Craniophora ligustri
Gene Symbol: pnr
Assembly: GCA_905163465.1
Location: LR990957.1:121539-125760[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.7e-17 3.3e-13 49.7 3.3 1 35 386 419 386 420 0.97

2 2 4.8e-18 2.4e-14 53.3 7.5 1 35 447 480 447 481 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.7e-17	3.3e-13	49.7	3.3	1	35	386	419	386	420	0.97
2	2	4.8e-18	2.4e-14	53.3	7.5	1	35	447	480	447	481	0.97

Sequence Information

Coding Sequence: ATGGACAGCGCGGCGCAAATGGATCAGCGCCCCGCCGAGCTCACCAATGATGACGGCGTCAAGGACGAGCCCCCCGAGCAGTCGTCGCTGGACGACCAGCAGCAGCTACAAGTGCAGCACTACGCTGCCAAGCTGGAAGAGGCTGAAGCGCGCGAACAACACCACTATGACGAAGAGCGCTTGCGTCTCGCTGAAGCCGAGACAGCGCGCTATCTTGCATTCAAACAGGAGCCGTACCGCGCGTTGCCGTCGCCTAGCGACAAGCGGCCGCCGCCACAGTACGCGCGGCCACCACAACGACCCGCGTACGGCCGCGGCCTTGCACTACGGTATGGTGCTCCGCACCACGTTATAGTAGCGCAGGAAGGTGAAGGCGAAGACGGCGGCCACGACTCCTACCTACACAAGGACAAGGAGCAGCTACAGGCCTACACGGGAGGCGAGGTGGCGCCCGCCGACACTCGGCAGTACGCCGCCGTGCTGGGAGAACAAGCCGCCTCTTCTTTGGAGATGATCCAGACGACAGCGCTTAACAATCAGCAAGCTGTAGGCGTGGCCTACCAGCAGGTGAAATATGAGACTCGCGGAGAGGGAGAGCCGCGTCCTACCACGTACGCGAGCCTGCAGCCTGTGACATCGGTGCACGGCGGGTACGCGTACGCCGGCCAGAGTCCGCAGTACGCCGGGGGCGGGTACGGCGCGTATGCGGGAGGCAGTAAGGAGCTTCTGACACTGTACGGCGGTGGTGCGGGCGCAGGCGGGGTGGTGGCGGGTGCGCGGGGGGACGAGTCTCCCCCCGGCCAGCTGCTGTACCGCAGTGATCCCACGCTCTCCTCGTCATCCCTGGCGCGCGGCACTCACGTAGTCTACGGCTCTGTGGTACCGCAATCACAAGCAGTGTACGAAACGCCACCCAGCCCCAACTCACAGCAGGTGACGCTATACACACACGGCAACACAGTGCAGTACAAGGTGGGCAGCGAGCACTACCTGGGGCAGGGCAGCGGCGTGGAGTACGTGCCCGTGTCGGGCTACGAGGGCGGCCTGCTGGTGGAGGGCTACCCGGCGCCCGCGCAGGCCTGGCCCGCGCACAACCTGCTGCCCATTGACGACGGCTTCGACCCCAGCATGGCGGGCATGGGTGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACCACACCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTCAACCGCCCGCCGCTCAAGGGGCAGAAGGCGAAACCGCAGCAGGCTCTGCCGACGAACGGAAACCGCCGCGTGGGCGTGACGTGCGCCAACTGCCGCACGTCCAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGCGGGCACGGCGGCGTGGCGCGGCCGGGCGCGGGACCGCTGGCCGCGGACCTCGCGCACAGGGTGCTGCCCCCGCTGTACGCGGCCGTGGAGGCGGCGGGGGCGGGGAGCGCGGGGGCGGCGGCCGCTCCGCTGCTGCTGCTGCCCGCCGCGCGCCACTCGGCCGATATGGTACCAGCGCTAGAGCGCGGCGCGGCGCACTGCCGGCCGCCGTCGCCGCCGTGA
Protein Sequence: MDSAAQMDQRPAELTNDDGVKDEPPEQSSLDDQQQLQVQHYAAKLEEAEAREQHHYDEERLRLAEAETARYLAFKQEPYRALPSPSDKRPPPQYARPPQRPAYGRGLALRYGAPHHVIVAQEGEGEDGGHDSYLHKDKEQLQAYTGGEVAPADTRQYAAVLGEQAASSLEMIQTTALNNQQAVGVAYQQVKYETRGEGEPRPTTYASLQPVTSVHGGYAYAGQSPQYAGGGYGAYAGGSKELLTLYGGGAGAGGVVAGARGDESPPGQLLYRSDPTLSSSSLARGTHVVYGSVVPQSQAVYETPPSPNSQQVTLYTHGNTVQYKVGSEHYLGQGSGVEYVPVSGYEGGLLVEGYPAPAQAWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARPGAGPLAADLAHRVLPPLYAAVEAAGAGSAGAAAAPLLLLPAARHSADMVPALERGAAHCRPPSPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017844; iTF_00018681; iTF_01378045; iTF_00041442; iTF_00040455; iTF_00810658; iTF_00809717; iTF_00274905; iTF_00274109; iTF_01126018; iTF_00468644; iTF_00467868; iTF_00445767; iTF_00327528; iTF_00001666; iTF_00185804; iTF_00186796; iTF_00000851; iTF_01222135; iTF_01535496; iTF_00712518; iTF_01532688; iTF_00929235; iTF_00044124; iTF_00375921; iTF_00948425; iTF_00870219; iTF_01333388; iTF_01539277; iTF_00447824; iTF_01533602; iTF_00685996; iTF_01062412; iTF_00446772; iTF_00302710; iTF_01063408; iTF_01064291; iTF_01065216; iTF_00075124; iTF_01534453; iTF_00042294; iTF_00043145; iTF_00851351; iTF_00852341; iTF_00772545; iTF_00952371; iTF_00974293; iTF_01179994; iTF_01180821; iTF_01119899; iTF_00831789; iTF_01093700; iTF_01440647; iTF_01094568; iTF_01095520; iTF_01030781; iTF_01027907; iTF_01031623; iTF_01026953; iTF_01028876; iTF_01029804; iTF_00888857; iTF_00365436; iTF_01084796; iTF_01085964; iTF_01074110; iTF_00622481; iTF_01173843; iTF_01117918; iTF_01118898; iTF_00112182; iTF_00300822;
90% Identity: iTF_01378045;
80% Identity: -