Basic Information

Gene Symbol
pnr
Assembly
GCA_905332915.1
Location
HG995288.1:157049-160405[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.9e-17 4.9e-13 49.5 3.3 1 35 459 492 459 493 0.97
2 2 6.4e-18 3.5e-14 53.1 7.5 1 35 520 553 520 554 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTGGTGCAGATGGAGCAGCAGGACGCGCGCCCCTCCGCCGAGGCACTGGAGCTGGTGAAGAGCGAGGCGCGCGCCGAGCAGGAGCAGCCGGGGGGCGACGGGAGTGCGGGGCCCGCCCCGGGCGCCGAACAGCAGGGGGCGGGATCGCGTGACGCCTCGCCGCCCGCGCACTCGCAGTCCGTGATCACATCACGCCGCGCCGTTCGCACCATCACAGCCGCCGGACACATCACCACGGACGAGCCAGCCGAGCTGCCGGATGAAGGCGTCAAGGACGAGCCGCCCGAGGCGCCAGCAACCGCGCTGGAAGAAGCGCAGCTACAGGTGCAACACTACGccgccaagctggaggaggcaGAGGCGCGCGAGCAGCAGCACTACGACGACGAACGTCTGCGCCTGGCCGAGGCGGAGACGTCGCGCTACCTGGCTTTTAAGCCGGAGCCCTATCGCGCACTGCCCTCACCTGACAAGCGCGCGCCGCCGCAGTACGCGCGCCCACCACCGCGCGCCGCCTACCCGCGTGGCCTGGCACTGCGCTACGGTGCGCCACACCACGTTATTGTGGCACAGGAAGGCGAGCCCGAAGACGCACACGATGCGTTCTTGCACAAGGACAAGGAGCAGATGCAGGCGTACGCGGGCGGCGAAGTGGCGTCAGGTGACGCGCGCCAGTACGCCGCCGTGCTGGGCGAGCAGGCCGCGTCCTCGCTCGAGATGATCCAGACTACGGCGCTCAACAACCAGCAAGCGGTGGGCGTGGCCTACCAGCAGGTGAAGTACGAAGCGCGCGGGGAGGGTGAGCCGCGCCCGACCACGTACGCCAGCCTGCAACCCGTGACGTCGGTGCACGGTGGGTACGCGTATGCCAGCCAGAGCCCGCAGTACGCGGGCGGTGGGTACGGCGCGTACGCTGGCGGCAGCAAGGAGCTGCTGACGCTGTACGGAGGTGGCGGGGGCGCGGGGAGTGCAGCGGGTGGTGGGGGCGCCCGCGGGGACGAGTCGCCGCCAGGCCAGCTGCTGTACCGCAGCGACCCCACGCTGTCGTCTTCGTCACTGGGACGCGGCGCACACGTCGTGTACGGCTCGGTGGTGCCGCAGTCGCAGGCGGTGTACGAGACGCCGCCCAGCCCTAACTCACAACAGGTGACGCTGTATACGCACGGTAACACGGTACAGTACAAGGTGGGCGGCGAGCACTACCTGGGGCAGGGCGGCGGCGTGGAGTACGTGCCCGTCTCCGGGTACGAGGGTGGGCTGCTAGTGGAGGGCTACCAGCCGGCGCAGGCCTGGCCCGCACACAATCTGCTGGCCATCGACGAGGGCTTCGACCCCAGCATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCTGCCGCCACCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTCAACAGGCCGCCGCTCAAGGGACAGAAGGCCAAGCCACAACAGGCACTTCCGACGAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACGTCCAACACCACGCTGTGGCGCCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTCAGTATGAAGAAGGATGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGTGGCGGGCACGGCGGCGTGGCGCGGCCGGGCGGCGGACCGCTGGCGGACGCCCCCGCGCACAAGGTGCTGCCCCCGCTGTACGCGGCGGTGGAgggcgcggcgccggcgcccgggccgctgctgctgctgccCGCCGCGCGGCCCTCGACCGACATGGTACCAGCGCTAGAGCGCGGCGCGCCGCACTACCGCCCGCCGTAA
Protein Sequence
MENVVQMEQQDARPSAEALELVKSEARAEQEQPGGDGSAGPAPGAEQQGAGSRDASPPAHSQSVITSRRAVRTITAAGHITTDEPAELPDEGVKDEPPEAPATALEEAQLQVQHYAAKLEEAEAREQQHYDDERLRLAEAETSRYLAFKPEPYRALPSPDKRAPPQYARPPPRAAYPRGLALRYGAPHHVIVAQEGEPEDAHDAFLHKDKEQMQAYAGGEVASGDARQYAAVLGEQAASSLEMIQTTALNNQQAVGVAYQQVKYEARGEGEPRPTTYASLQPVTSVHGGYAYASQSPQYAGGGYGAYAGGSKELLTLYGGGGGAGSAAGGGGARGDESPPGQLLYRSDPTLSSSSLGRGAHVVYGSVVPQSQAVYETPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYQPAQAWPAHNLLAIDEGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARPGGGPLADAPAHKVLPPLYAAVEGAAPAPGPLLLLPAARPSTDMVPALERGAPHYRPP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00384239;
90% Identity
iTF_00300822;
80% Identity
-