Basic Information

Gene Symbol
gata5-b_1
Assembly
GCA_947859195.1
Location
OX401904.1:10274556-10285300[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-16 2.6e-13 49.4 3.3 1 35 492 525 492 526 0.97
2 2 9.9e-18 1.8e-14 53.0 7.5 1 35 553 586 553 587 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTCGGGCAAATGGTGCGAGCCAGCGAGGAGCAGCGGGAGGCGGACGCCTCCGCGGAGGCTCTTCAACTGGTGAAGAACGAGGTGCGGCTCGAGCAAGAGCAGAGCGGCGAGCCCGCGCCGCAGGGGCAGGGACAGGGGCACGGGCAGGGGCAGAGGCAGGAGGCGGGGGTCGAGCCCACCGAGCAGCACGACCCGGCCGCGGAGCCCGCCATGCGCGACGCACACCTGCCGCACTCCCAATCGGTGATCACATCGCGGCGCGCCGTGCGCACCATCACGGCGGCCGGACACATCACCACCGCGGAGGAGGGCGGCGCGGGCGAGCTGGGCGCCGACGACGGCGTCAAGGACGAGCCGCCGGAGCAGCCGCAACTCGAGCACGACCACCAGCTACAACAGTATACGCCTAAACTCGAAGAGACTGCCGACGGACGAGATCCACAGCAACAATATGACGAGGAAAGACTGAGGCTAGCCGAGGCCGAAACGGCGCGGTACCTCGCTTTTAAGCAGGAGCCGTACCGGTCACTGCAGTCACCGCTGCCGAACGACAAGAGAATGCAGCCGCAGTACTCGCGCGCCCCGCAGCGACCCGCCTACGGCCGGGGTATAGCGCTGCGCTACGGGACACCGCACCATGTTATAGTGGCACAGGAGGGAGACGCCGAGGAGAATGCACATGATGCGTTTCTTGCGTACAAAGACAAAGCCGAACATCTTCAGGCGTACGCTACGAGCGGCGACGGAGCGAACGCGTCGACTGATGGACGGCAGTACGCCGCAGTGCTCGGAGAACAAGTGGCAACTTCGGCTCCTCTCGAAATGATTCAGACGACATCGTTAAACAACCAGCAAGCGGTCGGAGTGGCGTACCAGCAAGTGAAATACGAGACGCGCGGGGAGGGCGATCCACGCCCCACTACGTACGCGAGCTTGCAGCCGGTGACGTCAGTGCATGGCGGGTACGCGTATGCGGGGCAGAGTCCTCAGTACGGTAGTGGAGGGTACGGGACCTACGCCGGGGGTACTAAAGAGCTGCTGACATTATATGGTGGTGCGCCAAGCGGCGCGGGGCCCGCCGCGCGCGGCGACGAGTCGCCCCCGGGCCAGCTGCTCTACCGCAGCGACCCAACGCTGTCCTCGTCGTCGCTGACGGCCCGCGGCGCTCACGTGGTGTACAGCTCAGTGGTGCCGCAGTCGCAGGCCGTTTACGAGGCTCCGCCTAGTCCTAACTCTCAACAGGTGACGCTGTACACGCACGGCAACACTGTGCAGTACAAGGTGGGCGGCGAGCACTACCTGGGCCAGGGCGGTGGCCTGGAGTACGTTCCGGTGTCGGGCTACGAGGGCGGGCTGCTCGTCGAGGGCTACCCCGCGCCGGCGCAGCCCTGGCCCGCGCATAACCTGCTGCCCATCGACGACTCCTTCGACCCTAGCATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACCACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGCGTCAACCGGCCACCGCTCAAGGGGCAGAAGGCGAAACCGCAGCAAGCCCTGCCGACGAACGGAAACCGTCGCGTAGGTGTGACGTGCGCCAATTGCCGCACCTCCAACACCACGCTGTGGCGGCGGAACAACAACGGCGAGCCCGTCTGCAACGCGTGCGGATTGTACTATAAGCTGCACAATGTAAATCGGCCTCTAAGTATGAAGAAGGACGGCATCCAAACACGCAAGCGGAAGCCGAAGAGTATGGGCGGAGGGCACGGCGGCGTGGGGCGGCCTGCGGGCGCCGGCATCTCCGTGGAGGCACACACGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGCGGGCGGGGCGGGGGGCGCGGGCGCGGGCGCGGCGCCCATGCTGCTGCTGCCCGCCGCCCGGCACCAAGCCGATATGGTACCAGCGCTAGAGCGCGGCTCTGCGTCGGCGCACTACCGGCCGCCCTAA
Protein Sequence
MENVGQMVRASEEQREADASAEALQLVKNEVRLEQEQSGEPAPQGQGQGHGQGQRQEAGVEPTEQHDPAAEPAMRDAHLPHSQSVITSRRAVRTITAAGHITTAEEGGAGELGADDGVKDEPPEQPQLEHDHQLQQYTPKLEETADGRDPQQQYDEERLRLAEAETARYLAFKQEPYRSLQSPLPNDKRMQPQYSRAPQRPAYGRGIALRYGTPHHVIVAQEGDAEENAHDAFLAYKDKAEHLQAYATSGDGANASTDGRQYAAVLGEQVATSAPLEMIQTTSLNNQQAVGVAYQQVKYETRGEGDPRPTTYASLQPVTSVHGGYAYAGQSPQYGSGGYGTYAGGTKELLTLYGGAPSGAGPAARGDESPPGQLLYRSDPTLSSSSLTARGAHVVYSSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGLEYVPVSGYEGGLLVEGYPAPAQPWPAHNLLPIDDSFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVGRPAGAGISVEAHTHKVLPPLYAAVEAGGAGGAGAGAAPMLLLPAARHQADMVPALERGSASAHYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00384239;
90% Identity
iTF_01179994;
80% Identity
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