Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:22163-30608[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.01 30 4.8 0.0 21 47 169 195 161 201 0.86

2 12 0.12 3.5e+02 1.4 0.1 21 45 197 221 193 227 0.87

3 12 2.7e-05 0.079 13.1 0.3 22 49 226 252 221 257 0.85

4 12 0.11 3.2e+02 1.5 0.1 22 43 254 275 251 279 0.84

5 12 0.0021 6.3 7.0 0.5 21 43 281 303 273 314 0.83

6 12 1 3.1e+03 -1.6 0.0 22 39 310 327 306 340 0.72

7 12 0.22 6.5e+02 0.6 0.2 21 43 337 359 334 365 0.87

8 12 0.0075 22 5.2 0.0 21 47 365 391 363 398 0.84

9 12 0.96 2.9e+03 -1.5 0.0 23 45 395 417 391 420 0.85

10 12 0.00096 2.9 8.1 0.1 21 45 677 701 669 707 0.88

11 12 0.0028 8.2 6.6 0.1 22 44 706 728 700 733 0.88

12 12 0.00017 0.49 10.5 0.2 21 44 733 756 730 763 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.01	30	4.8	0.0	21	47	169	195	161	201	0.86
2	12	0.12	3.5e+02	1.4	0.1	21	45	197	221	193	227	0.87
3	12	2.7e-05	0.079	13.1	0.3	22	49	226	252	221	257	0.85
4	12	0.11	3.2e+02	1.5	0.1	22	43	254	275	251	279	0.84
5	12	0.0021	6.3	7.0	0.5	21	43	281	303	273	314	0.83
6	12	1	3.1e+03	-1.6	0.0	22	39	310	327	306	340	0.72
7	12	0.22	6.5e+02	0.6	0.2	21	43	337	359	334	365	0.87
8	12	0.0075	22	5.2	0.0	21	47	365	391	363	398	0.84
9	12	0.96	2.9e+03	-1.5	0.0	23	45	395	417	391	420	0.85
10	12	0.00096	2.9	8.1	0.1	21	45	677	701	669	707	0.88
11	12	0.0028	8.2	6.6	0.1	22	44	706	728	700	733	0.88
12	12	0.00017	0.49	10.5	0.2	21	44	733	756	730	763	0.92

Sequence Information

Coding Sequence: ATGGAGGTTAATGATGTTCCTTGCGAGGAAAGGATTTTCAAAATTAAAAAAGAGGAATTTCAAATTGATGAAAATGATTGTCATCCAGAATCTTATTTATTTCAATCCATAGATTTTGTAAAGCAAGAAGAAAATAATTCAATGAGTGAGGAAATTACTATTGTACCTGAATTTATCAAAGAAGAACCTGAAGATACTGACGATGAAAATTATAAAATTTCAATTTCCACTGAAGAGCCCGACGCCGTAAAAACCGACACTACCTTATCAGAAAATTCAATAGCAAAACGTACAAGATCCAAGCGAACTCCAAAATCTTCTCCAAAAACCACAAACCCAAAAAATAAGACTAAAAAAGTAAATCCAAAAAGTATCACCTTAAAATCAAAGAAATTTGCAAAAAGCACTTTGCAAATTGACCCGGCGGAAGTTTATACATGTGAAGTATGTTCCGGGAAATTCCAGCGAAAAGGTAATTTCAATAAACACAAATTAGTCCATACCGGCGAAAAGCCTTATGGATGCGACTTATGCTCGTTGCGATTCAATCAAAATAGTTCTCTGAAGCGACACATGCACACGCACTCGGAGGAGAAGCCTTACGCTTGCAGTATGTGTCCCTGGAAATTCCGACTGAACCATCAGTTGCAATCTCACTTGAACACCCACATGGAAGAGAAGCGCTACACGTGCGATGTCTGTTCCAAAAAATTCCGGCAGAAACACAGCTTGAGAAGACATCTTGGTATCCACTTCAACGAAAGACCTTTTTCTTGCGACGTTTGTTTCAGGAGCTTTCGAGAAAAGACTCAAATGAAAATCCACAAGCGAATCCACTCCGGAGAGCAACCCTACGCTTGCGAAATTTGTCCTGCGAAGTTCCGCGTAAGGGGTCTGCTGAACAGACACAGACTAGCTCATGCTGAAGAAAAACCTTATGCTTGCAATTTTTGTCCCGCGACTTTTCACTTGAAGTCTCGGTACAAAACCCACATGCTTATTCATACAGGGGAAAAACCCTACCAATGTGACGTATGTTCCGTTCAGTTCCGGCATAAGTGTTCGTTGAATAAACACACTTTGATTCACACCGGAGAAAAACCTTACACTTGCCAGGTTTGCTTGAAGCAATTTCGCGAGAAAGGGACTCTGGATAAACATATGGTTGTTCATATGGAAGGTAAACCTTTTGGCTGTGATGTCTGTTCTTTTAAAACTCGCCGGAAGCAACGATTAAACTCCCATATGAAAATTCATTTAGAAGACGATTTTGCATTGGGAAAAATGAACATGGAAGTTTTGCCATTTGAAACAGTGGTTATAAAAGTTGAAAAGAATGATGAGGACTGGCGAATAAATGAGGTTCTGGAAAATCCTTTAGACATTGGAAAAATAGAAGATGAACTTGAAGGAGATTCAGTGGTTATAGAAAATACTATTGATGTACCTGATGTCAAAGTTATTGACAGTGTAAATTTTACGTTTGGAGGATCAGAATCAGTTTTAAATGAGGAAAAAAGTGATGACGAGTTTAACGCGAATCTAGATTATCCGATAGATATTGAAGAAATCAAGATCGAAGAAACTGAAGATACAATAATTTATCCAAATATTACTGATGTATCAAAGACGACAAAAATCAAAAAAAATGCAGCAAATGATCTCCAAGAAGTTCCCACGGAAGAAACTCCAAAAAATGAATCCATGTGGAAAACATTCAAATGCGATAAATGCGCAATGGAATTTGTCAATGAAAGTTCTCTAGCAACTCACTCAAAAAAATATAAATTTAACTGCGACGTCTGTCCAAAGTGTTTTATATCAAGACAAGGATTGTGGTACCACCTGAAATCGCACTACGGCCCCAAACCATTTAAATGCGAAGTATGTCCGGCTGATTTTGAGTTGAAATCCGGATTGATAGAGCACTCACGAACTCACGCAGGAGACATGAGCTTCTCTTGTACCCTGTGTGCCTACAAAACTCGGTACAAAAGTTCCTTGAACAGACACGCTCGTGTTCATACCAGAGAGAAGCCTTTTGCGTGTGACCTCTGTTCCGCGACCTTCCGGGAACAAGGTCACTTGAAGAGACACAGTCAGATTCATACTGGAGAAAAGCGCTACACCTGTGATGTCTGTTCCGCCAAGTTCAGGGAGAAGAGCACCTTGAGACAGCACATTATTATTCACACTGGGGAAAAACCCTACAGTTGTTCTGTTTGTGCGGCTAACTTTAGGCAGCAGAATCATCTGGATAGACATATGGTCAACCACAATGGAGAAAAAAGTTATGCTTGTCAAATTTGTTCCTTGGAGTTCCATGGATTGAAGTTAATAATTGAAGACAGTGAATTTTATTTTTATGAGAACTAA
Protein Sequence: MEVNDVPCEERIFKIKKEEFQIDENDCHPESYLFQSIDFVKQEENNSMSEEITIVPEFIKEEPEDTDDENYKISISTEEPDAVKTDTTLSENSIAKRTRSKRTPKSSPKTTNPKNKTKKVNPKSITLKSKKFAKSTLQIDPAEVYTCEVCSGKFQRKGNFNKHKLVHTGEKPYGCDLCSLRFNQNSSLKRHMHTHSEEKPYACSMCPWKFRLNHQLQSHLNTHMEEKRYTCDVCSKKFRQKHSLRRHLGIHFNERPFSCDVCFRSFREKTQMKIHKRIHSGEQPYACEICPAKFRVRGLLNRHRLAHAEEKPYACNFCPATFHLKSRYKTHMLIHTGEKPYQCDVCSVQFRHKCSLNKHTLIHTGEKPYTCQVCLKQFREKGTLDKHMVVHMEGKPFGCDVCSFKTRRKQRLNSHMKIHLEDDFALGKMNMEVLPFETVVIKVEKNDEDWRINEVLENPLDIGKIEDELEGDSVVIENTIDVPDVKVIDSVNFTFGGSESVLNEEKSDDEFNANLDYPIDIEEIKIEETEDTIIYPNITDVSKTTKIKKNAANDLQEVPTEETPKNESMWKTFKCDKCAMEFVNESSLATHSKKYKFNCDVCPKCFISRQGLWYHLKSHYGPKPFKCEVCPADFELKSGLIEHSRTHAGDMSFSCTLCAYKTRYKSSLNRHARVHTREKPFACDLCSATFREQGHLKRHSQIHTGEKRYTCDVCSAKFREKSTLRQHIIIHTGEKPYSCSVCAANFRQQNHLDRHMVNHNGEKSYACQICSLEFHGLKLIIEDSEFYFYEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379806;
90% Identity: iTF_00382052;
80% Identity: iTF_00382052;