Basic Information

Insect: Cotesia sesamiae
Gene Symbol: -
Assembly: None
Location: scaffold:17011-25480[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00013 0.013 15.9 0.3 2 23 126 147 125 147 0.96

2 11 0.0065 0.64 10.6 3.2 2 23 214 235 213 235 0.94

3 11 4e-05 0.004 17.5 4.4 1 23 355 377 355 377 0.97

4 11 1.7e-06 0.00017 21.9 0.8 1 23 383 405 383 405 0.98

5 11 1.1e-06 0.00011 22.4 2.1 1 23 411 433 411 433 0.98

6 11 1.3e-06 0.00013 22.2 1.6 1 23 459 481 459 481 0.98

7 11 1.7e-09 1.7e-07 31.3 0.9 1 23 487 509 487 509 0.98

8 11 2.5e-06 0.00025 21.3 3.4 1 23 515 537 515 537 0.98

9 11 7.5e-07 7.5e-05 23.0 2.2 1 23 543 565 543 565 0.96

10 11 2e-06 0.0002 21.6 3.9 1 23 571 593 571 593 0.98

11 11 4.7e-06 0.00047 20.5 3.0 1 23 599 621 599 621 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00013	0.013	15.9	0.3	2	23	126	147	125	147	0.96
2	11	0.0065	0.64	10.6	3.2	2	23	214	235	213	235	0.94
3	11	4e-05	0.004	17.5	4.4	1	23	355	377	355	377	0.97
4	11	1.7e-06	0.00017	21.9	0.8	1	23	383	405	383	405	0.98
5	11	1.1e-06	0.00011	22.4	2.1	1	23	411	433	411	433	0.98
6	11	1.3e-06	0.00013	22.2	1.6	1	23	459	481	459	481	0.98
7	11	1.7e-09	1.7e-07	31.3	0.9	1	23	487	509	487	509	0.98
8	11	2.5e-06	0.00025	21.3	3.4	1	23	515	537	515	537	0.98
9	11	7.5e-07	7.5e-05	23.0	2.2	1	23	543	565	543	565	0.96
10	11	2e-06	0.0002	21.6	3.9	1	23	571	593	571	593	0.98
11	11	4.7e-06	0.00047	20.5	3.0	1	23	599	621	599	621	0.99

Sequence Information

Coding Sequence: ATGTTTATTGTTACAAAACAAATAGATAGTGAAAATATCAGTAAACTATGTCGAACTTGTTTAAGAGAAGATGGAAAAAAAATGATTTGTCTGTTTGTTGGTCCAGCTGAGACGTCACTCGCTGCGAAATTACGATCTTTGTCTTGTTTAGAGGTGTGGCAGGGAGATGGATTGCCGGAAAAATTATGCGACCGCTGTGTGACGAGAGCAGAGTCAGCTCTTTTATTTCGAGAGCAGTGTCGAGCGGCTGACAGAGCATTGCGACAAGCAGCAGCACGGGTTTCAGGACTCGCAAATTATACTACTGTATCAGGTTGCAAGTTGTATCAGCAGAATCACGGATTAACTCCAATTGAAAGCTCTCAGAAAACACTAAAATGCAGCGACTGTGGTGCTGTGTTTATGAACTATCAGGAATTACAAACTCACAGTCGCTTGCACAATCCTTTTGGTCAAGAGGCGGGTTCTCTTTCGCACATGCATATCGTCGAAGCACAAAATCCGTACTTTAATTCAGATACTTCAATTTCTTCGTCGGTAATTGACAATAATCATGAATCAATTATAAATTTAAGTAGACCCAGCCCATTGCCAGCAGCAGAATTATCAAGAAAAAATGACAGACCAGCATGCGCTCTTCATTGCTCTCTCTGTAACCACACATTTCCTGACAGAAATCAGTTGATTAGTCACAATTTATCTCACTGTGCTAATAACGAAGACACTTCTTGCGACAGCATAGAAATTGGAGATGATTCTAATCCGATTGCGGAAAATTTGAGTTTCCAAGCGATTGATCTTGCTTATCCGCGACATAATCCATCAATTGACTTCAACTATTCCGAAAATTTAAACCTTGCGTCAGCTGATCCAACAACTAACAATTTAGTCAGTACAAATTTGGAGATACAAAATTCTTCCTCTAATTTATCAGATCACATAATTCCCTTCCCGAGATTTTCTGATCAACTTAACGATCAAGCTCTGAACAATGAGGAAAATTTAGCAAGTAATGGGAATTTACCTGTACAAATAAATTCTGAACACGAGGTTGATAAAAAACACAAATGCTTGACATGCAATAAAACTTTTGCGCAAAAGTCAAAATTAAAAACTCACGAATTGTCCCATACTGGCGAGAAACCATTTCGATGTGTCAATTGTGACAAAGCTTACACTTCAAAGAGTAAATTAAATGCTCATGTGAGATTACACACGGGATCTAACGTTCATCGGTGTGATGTTTGTCAAAAAACTTTTTCTTATCCTTCTTATTTGGTAGAACATTTAAAAACTCACAGTATTAATAATTCAAATGGTAATAATAAAAATGAGATTAAAAATAATGGAAATGCTGATTTGAATTCAGAAAAATTTGAGTGTTCAATTTGTGGTAAAAAATTTCGTATAAAAAAAAATTTACGGCTGCATTTGAAACTACACAGTGGAAAAGATTTATTTAACTGTGAAATTTGTGATAAAGTATTTAGTCAAAAATATAATCTTAAAGTTCATATGAGAATTCACAAGCGAATAAAAATCCACAAGTGCGAGTATTGCAGCAAGTCTTTCAGTGAAAAGGGTAATTACAAAGAACACTTGAGAATACACACAAAAGTTAAGCCATTTGTGTGTAAATTATGCAATAAAGCTTTTTCACAATCTAGTCACTTAAAAAATCATGAAGCTTCTCATGACAATCAACGACCTTATCAGTGTCGATTGTGCGGTAAACGGTTTAAACTGTCATCACATTTGAAAAGACACGTTAATTTACATACTTCAGTTAAAAACTTCAAATGTATGCAGTGTGATCAAATGTTTACTCAGGCCTTCAGTCTTAAAAGACATTTAAAAAAGCATAATGATGTTACTTAA
Protein Sequence: MFIVTKQIDSENISKLCRTCLREDGKKMICLFVGPAETSLAAKLRSLSCLEVWQGDGLPEKLCDRCVTRAESALLFREQCRAADRALRQAAARVSGLANYTTVSGCKLYQQNHGLTPIESSQKTLKCSDCGAVFMNYQELQTHSRLHNPFGQEAGSLSHMHIVEAQNPYFNSDTSISSSVIDNNHESIINLSRPSPLPAAELSRKNDRPACALHCSLCNHTFPDRNQLISHNLSHCANNEDTSCDSIEIGDDSNPIAENLSFQAIDLAYPRHNPSIDFNYSENLNLASADPTTNNLVSTNLEIQNSSSNLSDHIIPFPRFSDQLNDQALNNEENLASNGNLPVQINSEHEVDKKHKCLTCNKTFAQKSKLKTHELSHTGEKPFRCVNCDKAYTSKSKLNAHVRLHTGSNVHRCDVCQKTFSYPSYLVEHLKTHSINNSNGNNKNEIKNNGNADLNSEKFECSICGKKFRIKKNLRLHLKLHSGKDLFNCEICDKVFSQKYNLKVHMRIHKRIKIHKCEYCSKSFSEKGNYKEHLRIHTKVKPFVCKLCNKAFSQSSHLKNHEASHDNQRPYQCRLCGKRFKLSSHLKRHVNLHTSVKNFKCMQCDQMFTQAFSLKRHLKKHNDVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00379813; iTF_00381346; iTF_00380544; iTF_01004519; iTF_01006484; iTF_01003725; iTF_01005462;
90% Identity: iTF_00380544;
80% Identity: -