Basic Information

Insect: Microplitis deprimator
Gene Symbol: -
Assembly: GCA_964016945.1
Location: OZ024706.1:2457792-2460584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.5e-05 0.0067 17.8 0.1 2 23 126 147 125 147 0.97

2 11 0.0069 1 10.9 3.7 2 23 214 235 213 235 0.94

3 11 0.00012 0.019 16.4 6.0 1 23 361 383 361 383 0.95

4 11 1.3e-05 0.0019 19.5 0.9 1 23 389 411 389 411 0.96

5 11 2e-06 0.00029 22.1 0.8 1 23 417 439 417 439 0.98

6 11 5.3e-07 7.9e-05 23.8 1.7 1 23 466 488 466 488 0.98

7 11 3.9e-08 5.9e-06 27.4 1.0 1 23 494 516 494 516 0.98

8 11 6.3e-07 9.4e-05 23.6 2.9 1 23 522 544 522 544 0.98

9 11 1e-06 0.00015 22.9 2.2 1 23 550 572 550 572 0.96

10 11 5.2e-06 0.00078 20.7 3.8 1 23 578 600 578 600 0.97

11 11 5.3e-06 0.00079 20.7 2.9 1 23 606 628 606 628 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.5e-05	0.0067	17.8	0.1	2	23	126	147	125	147	0.97
2	11	0.0069	1	10.9	3.7	2	23	214	235	213	235	0.94
3	11	0.00012	0.019	16.4	6.0	1	23	361	383	361	383	0.95
4	11	1.3e-05	0.0019	19.5	0.9	1	23	389	411	389	411	0.96
5	11	2e-06	0.00029	22.1	0.8	1	23	417	439	417	439	0.98
6	11	5.3e-07	7.9e-05	23.8	1.7	1	23	466	488	466	488	0.98
7	11	3.9e-08	5.9e-06	27.4	1.0	1	23	494	516	494	516	0.98
8	11	6.3e-07	9.4e-05	23.6	2.9	1	23	522	544	522	544	0.98
9	11	1e-06	0.00015	22.9	2.2	1	23	550	572	550	572	0.96
10	11	5.2e-06	0.00078	20.7	3.8	1	23	578	600	578	600	0.97
11	11	5.3e-06	0.00079	20.7	2.9	1	23	606	628	606	628	0.99

Sequence Information

Coding Sequence: ATGTTTATTGTCACAAAACAAATAGACAGTGAGAATATTAGTAAATTATGTCGGACTTGTTTAAGAGAAGATGGAAAGAAAATGATTTGTCTTTTTGTTGGCCCTGCTGAGACTTCACTTGCTGCTAAATTACGTTCTTTATCCTGTTTAGAGGTATGGCAAGGCGATGGATTACCAGAAAAGTTGTGCGATCGCTGTGTAACAAGAGCTGAATCTGCGCTTTTATTTCGGGAGCAATGTCGAGCAGCTGATAGAGCCTTAAGACAAGCAGCAGCTCgaGTCTCAGGACTTACGAATTATACAACAGTATCTGGTTGCAAATTATACCAACAAAATCAAGGATTAACACCAATAGAAAGCTCGCAAAAGACTTTAAAATGTAGTGACTGCGGTGCCgtattcataaattatcaaGAGTTACAAATCCACAGTCGCATACATACTCCTTTTATCCAAGAGTCAACTTCTCTGTCTCATATGCACATTGTGGAATCACAAAACCCATATTACAATCCAGATACTTCAATCTCTCCTTCGATAATCGCTAACAATCATCATGAATCGATTGTTAATTTAAGTAGGCCCAGTTCGCTGTCAACTGAactatcacaaaaaaatgagAGACCAGCATGTGCTCTCCATTGTTCTCTATGCAATCATACATTCCCCAACCgaaatcaattgataaatcataatttatcacaCTGTCCTAACAATGAAGACACATCATGTGATGATAGCATAGAAATCGGTGATGATTCAAATCCTATAGCAGAAAATCTCAGTTTTCAAGCAATTGATCTCGCATATCCACGACACAATCCTTCAATTGACTTCAATtatcctgaaaatttgaatctttCATCAGCAGATCCAACGACAAATGATTTAGTAAGAGGAGGATTAGAAATCCAAAGTTCTTCCTCTAATTTATCAGACCAGATAATTCCATTTCCAAGATTTCCCGATGATTTGAACGGTGAGACTTTGagtaatgagaaaaatttatctagtAATGGGAATTTGCCagtacaaaataattcaaatcacAATGAACTAGTGAATTTACCTCAGAAAAAACATAAATGCCTGACgtgtaataaatcattttccCAAAAATCGAAGTTGAAAACTCATGAGTTTTCTCATACTGGCGAGAAACCATTCAAGTGCATCAATTGTGATAAAGCCTACACTTCAAAGAGTAAATTAAATGCTCACATAAGATTACATACTGGATCTAACATTCATCAGTGCGACGTCTGTCAAAAAACTTTTGCTTATCCCTCGTATTTAATAGagcatttgaaaattcataatatcAATTCAAGTTCGCGGGTAAACATTTCAAATGAGGTAACAAACAACagcaaaattaattcaaattcagaaaaatttgaatgctcGATttgcggaaaaaaatttagtatgaaaaaaaatttgcggttacatttaaaattacacagCGGTAATGGTTTATTTAATTGCGAAAtttgtgataaattatttagccAAAAGTACAATCTTAAAGTTCACATGAGAGTTCATAAGAGAATAAAAGTCCATAAATGTGAATATTGTGATAAATCTTTCAGTGAAAAAGGTAATTATAAAGAACATTTGAGAATACACACGAAAGTTAAACCGTTCGTATGTAAATTATGCAATAAAGCCTTTTCGCAATCTAGTCATTTAAAAAACCACGAAGCCTCTCATGATAATCAACGGCCTTATCAGTGCCGACTGTGCGGTAAACGATTCAAACTTTCGTCGCATTTAAAGAGACATGTTAGTTTACATTCGTCAGTCAAAACTTTTAAATGTTTACAGTGTGATCAGATGTTCACTCAGGCGTTTAGTCTCAAAAGACATTTGAAAAAACATAATGAAgctatttaa
Protein Sequence: MFIVTKQIDSENISKLCRTCLREDGKKMICLFVGPAETSLAAKLRSLSCLEVWQGDGLPEKLCDRCVTRAESALLFREQCRAADRALRQAAARVSGLTNYTTVSGCKLYQQNQGLTPIESSQKTLKCSDCGAVFINYQELQIHSRIHTPFIQESTSLSHMHIVESQNPYYNPDTSISPSIIANNHHESIVNLSRPSSLSTELSQKNERPACALHCSLCNHTFPNRNQLINHNLSHCPNNEDTSCDDSIEIGDDSNPIAENLSFQAIDLAYPRHNPSIDFNYPENLNLSSADPTTNDLVRGGLEIQSSSSNLSDQIIPFPRFPDDLNGETLSNEKNLSSNGNLPVQNNSNHNELVNLPQKKHKCLTCNKSFSQKSKLKTHEFSHTGEKPFKCINCDKAYTSKSKLNAHIRLHTGSNIHQCDVCQKTFAYPSYLIEHLKIHNINSSSRVNISNEVTNNSKINSNSEKFECSICGKKFSMKKNLRLHLKLHSGNGLFNCEICDKLFSQKYNLKVHMRVHKRIKVHKCEYCDKSFSEKGNYKEHLRIHTKVKPFVCKLCNKAFSQSSHLKNHEASHDNQRPYQCRLCGKRFKLSSHLKRHVSLHSSVKTFKCLQCDQMFTQAFSLKRHLKKHNEAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382053;
90% Identity: iTF_01005462;
80% Identity: -