Basic Information

Insect: Cotesia rubecula
Gene Symbol: -
Assembly: None
Location: scaffold:137-3007[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.2e-05 0.0033 18.1 0.7 2 23 111 132 110 132 0.97

2 17 0.00051 0.053 14.3 0.4 1 23 138 160 138 160 0.96

3 17 2e-06 0.00021 21.9 2.4 1 23 166 188 166 188 0.98

4 17 8.4e-05 0.0088 16.8 0.6 2 23 190 211 189 211 0.96

5 17 0.00055 0.057 14.2 0.3 1 23 217 239 217 239 0.97

6 17 0.0011 0.11 13.3 0.9 2 23 246 267 245 267 0.95

7 17 8.8e-05 0.0092 16.7 1.3 1 23 273 295 273 295 0.98

8 17 4.7e-05 0.0049 17.6 4.6 2 23 301 322 300 322 0.97

9 17 1.1e-07 1.1e-05 25.9 0.2 1 23 328 350 328 350 0.99

10 17 1.1e-06 0.00011 22.8 0.6 1 23 356 378 356 378 0.99

11 17 5.1e-05 0.0053 17.5 0.5 2 23 385 406 384 406 0.96

12 17 2.5e-05 0.0026 18.5 2.6 1 23 412 434 412 434 0.98

13 17 0.33 35 5.5 1.0 1 16 440 455 440 462 0.81

14 17 8.1e-05 0.0085 16.8 0.3 2 23 469 490 468 490 0.97

15 17 0.0003 0.031 15.0 1.2 1 20 496 515 496 518 0.94

16 17 0.0013 0.14 13.0 0.2 2 23 526 547 525 547 0.95

17 17 0.13 14 6.7 0.5 2 23 555 576 554 576 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.2e-05	0.0033	18.1	0.7	2	23	111	132	110	132	0.97
2	17	0.00051	0.053	14.3	0.4	1	23	138	160	138	160	0.96
3	17	2e-06	0.00021	21.9	2.4	1	23	166	188	166	188	0.98
4	17	8.4e-05	0.0088	16.8	0.6	2	23	190	211	189	211	0.96
5	17	0.00055	0.057	14.2	0.3	1	23	217	239	217	239	0.97
6	17	0.0011	0.11	13.3	0.9	2	23	246	267	245	267	0.95
7	17	8.8e-05	0.0092	16.7	1.3	1	23	273	295	273	295	0.98
8	17	4.7e-05	0.0049	17.6	4.6	2	23	301	322	300	322	0.97
9	17	1.1e-07	1.1e-05	25.9	0.2	1	23	328	350	328	350	0.99
10	17	1.1e-06	0.00011	22.8	0.6	1	23	356	378	356	378	0.99
11	17	5.1e-05	0.0053	17.5	0.5	2	23	385	406	384	406	0.96
12	17	2.5e-05	0.0026	18.5	2.6	1	23	412	434	412	434	0.98
13	17	0.33	35	5.5	1.0	1	16	440	455	440	462	0.81
14	17	8.1e-05	0.0085	16.8	0.3	2	23	469	490	468	490	0.97
15	17	0.0003	0.031	15.0	1.2	1	20	496	515	496	518	0.94
16	17	0.0013	0.14	13.0	0.2	2	23	526	547	525	547	0.95
17	17	0.13	14	6.7	0.5	2	23	555	576	554	576	0.93

Sequence Information

Coding Sequence: GAGCCTGATAATGAAGAAGCTGCGGATCCACTGGCAGGAGTTACCGAAACACAGGCTGAGGAATCATCGACGGGTTCAGACTTGAAAGGATTATTAGACAGCAATCCGACTAACTATTCTCTAGATAGCAATCAGTATACATTGATTGCTAATGAAAATTTAATTTTAATAAAAGATGAATACGACAGCTCACCTGAAGTAATCAGTGATGTCAAAGAAACGAATGTAAAATCATCAAAGAGGCCAAAAGTTACTCAGAAAAAGGAAAGACAGTCTCGTAGTAAAAAGAAACGAAGTTCAAAACCTGCAAAAAAGAAAGCTAAACTTTTGAAATGCGACAGGTGTCCTGCTCTATTTGACTACAATAGTAACCTTGAAAGACATAGGCGAACTCACTCACCGAAAAAACCATACACTTGCGACATTTGTGGAACAAAATTTGCTTGGAAACGTAATTTAAAAGGTCATATATTTTTACATTCTGGAGAGCGACCTTTCAAATGTAAGACATGCTTGAAAACATTTAACAATAAAAATACACTGGAAAGACATATGATTATTCACTTAGAGTGCGACGTCTGTTTGACGACATTCGAAACGAAACGCAGTCTATCTAGACATATGACGATTCACGCAACCGACAGGAAGTTTGAATGTGATATGTGTTTAGCAAGATTCATTAAAAAACGTGAACTTACCAATCATATAATGGCTCACACAGGGGAAAAACCATGGCACTGTGAGGTTTGCCCAGCAAAATTTAGTCAGAAGTTGTATTTAAAAAATCATAAAATTGTTCATGCAGAACAATTACCGTTTGAGTGTAAGACTTGTTCCGAAAGATTTGATACGGAAGACAATCTTTCAGAGCACAAAAAGTCTCATTCGAAAAATTTATGGCAATGTACAATTTGTAATAAAAAATTTACGTGGAAACATCATCTCGAGAAACACATACTAACACATACCAGGGCACGACGTTACAGGTGTCCAACGTGTCCAGCAGCGTTTGGTTCTAATAGTAATCTCACTAGACATATTCGCTCTCATACAGGCGAGAAACCATTCCAATGTGAAATTTGCGAAGCAAGATTTAGTGAGAAACGTAATCTCCAAAATCATATTAATACCCATACAGGAGAAAAGCCGTGGCAGTGTGACAACTGTCCAGCGAAATTTGGATCCAGGTCCACATTGACCAAACACCAGCAACTGCATAAGCAACCACTTTTATTTTCATGTGACCACTGCTCACAGGAATTTGTTTCAAAACGGAAGCTCATCAAACATATACTAACCCATGCGGACAATTGGCCATTTCAATGTGAAATTTGTTCAGCAAGATTCACCGGGAAAAGAAGTATGTATTTTCACTCTCTGAGTCACACAGGTGAAAAACCATGGGAGTGTGAAATTTGTTTTGCTAAATTTGCTCAAAAAGCTTATTTAACAAGACATAAACTTACTCATATAGATATGCTATCATACAAGTGTCCTCACTGTTCAGAGCGATTTCATTCGGTAGAAAATCTTAATGAACATATACCAATTCACATGGCTCCTAAAATGGTTATACAGTGTGAATTATGTTCAGCAACGTTTCGCGAAATACGGAATTTAAACAATCACATGGTACTTCATTCTCAAGGAGAAGAACCTTGGAGATGTGAAATTTGTTCAACAGGTTTTAGATGGAAGTTTGATTTAGATAAACATAAACTTGACCATTCTAAACTCATCGAAAAGTGTATA
Protein Sequence: EPDNEEAADPLAGVTETQAEESSTGSDLKGLLDSNPTNYSLDSNQYTLIANENLILIKDEYDSSPEVISDVKETNVKSSKRPKVTQKKERQSRSKKKRSSKPAKKKAKLLKCDRCPALFDYNSNLERHRRTHSPKKPYTCDICGTKFAWKRNLKGHIFLHSGERPFKCKTCLKTFNNKNTLERHMIIHLECDVCLTTFETKRSLSRHMTIHATDRKFECDMCLARFIKKRELTNHIMAHTGEKPWHCEVCPAKFSQKLYLKNHKIVHAEQLPFECKTCSERFDTEDNLSEHKKSHSKNLWQCTICNKKFTWKHHLEKHILTHTRARRYRCPTCPAAFGSNSNLTRHIRSHTGEKPFQCEICEARFSEKRNLQNHINTHTGEKPWQCDNCPAKFGSRSTLTKHQQLHKQPLLFSCDHCSQEFVSKRKLIKHILTHADNWPFQCEICSARFTGKRSMYFHSLSHTGEKPWECEICFAKFAQKAYLTRHKLTHIDMLSYKCPHCSERFHSVENLNEHIPIHMAPKMVIQCELCSATFREIRNLNNHMVLHSQGEEPWRCEICSTGFRWKFDLDKHKLDHSKLIEKCI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382232;
90% Identity: iTF_00381522;
80% Identity: iTF_00381522;