Crub006967.1
Basic Information
- Insect
- Cotesia rubecula
- Gene Symbol
- retn
- Assembly
- None
- Location
- scaffold:14713-19755[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-20 1.9e-16 60.6 0.0 17 89 11 81 5 81 0.94 2 2 2.1 7.8e+03 -2.3 0.0 17 38 209 232 178 240 0.62
Sequence Information
- Coding Sequence
- ATGTGTAGATTTATATACAACAATATTGTTGGAACTCCAATCAATCGATTACCTATTATGGCAAAGTCTGTTCTTGACCTGTACGAACTATATAATTTAGTGATTGCCCGAGGTGGTTTAGTAGACGTAATAAACAAAAAATTATGGCAAGAAATTATAAAAGGCTTACACCTGCCCTCGAGTATTACTTCTGCAGCGTTTACTTTACGTACACAGTACATGAAATATTTATACCCGTACGAGTGCGAGAAGAAACGACTATCGACACCAGCGGAGTTGCAAGCGGCGATAGACGGGAATAGACGGGAAGGACGTCGCAGCAGTTACGGAGCCTACGGAGGAGGTAGTGGTGATAACATGGTACCACGCACCCCGAGCACACCTGGTTCATTGGCACTGCATGCACAAATGTCACCGCTATCTTTAGTATCTGCGTTGGGGCAGCACCACGGGGCTCAGGCGATTGCTAACGGCAGCGCAGCACACACACCTCTGCCATACCATCCTCATCATCCCCAACATCAGCAAGCCGCCGACTATCTAAAAATGCTGCACCGAGACTTTCACCGTGGTACAGGAGCAACCTCACCGCCGATGACGCTGAAGCACCAGGGTTCCCCAGAAGGCACGCCTCCGCGCGACACAAGAGAAGCGCTGATGGAGATGTCGAAGCTGACCCTGTGGAACATGTACAACCCTTTGTACGGAGGACTGGCCCAGCCGCCGGTGTCTCCGCAGACTTCGCACTCGCCTCACCCGCAGTCGACGAGCCCAGAGCCGCAAAGAGAAGCCCTGGACCTGGGGCTCCGCACATCTCCAACCTCGACGTCGCCGCTCCGCCACAGCTCGCCCTCCTCCGGCGGAAGTCTCCAAGTAAAGAGAGACCGGGACTCCCACGAGCCCTCCGCACTCATCTCTCACAAACGGGCCCTCTCCGAAGACGAGGGGCCTCATGAGAAAATCCCCGCTCTTCCCGGGACTCATATTAAGATCTCGAACCGCGGGGACGGCAGGAACGGCGACAACTCCCTCGCCGTCAGCATGGAGATCAACGGAATGATGTACCAGGGTGTTCTTTACGCACAAAGCGACAACAATAATAAATCTATCAGTATGAATAATAATAACAACAAAACAAGGAGTTTAGTATCTTTTAAATTCTCCGGTGAATCCTGA
- Protein Sequence
- MCRFIYNNIVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKRLSTPAELQAAIDGNRREGRRSSYGAYGGGSGDNMVPRTPSTPGSLALHAQMSPLSLVSALGQHHGAQAIANGSAAHTPLPYHPHHPQHQQAADYLKMLHRDFHRGTGATSPPMTLKHQGSPEGTPPRDTREALMEMSKLTLWNMYNPLYGGLAQPPVSPQTSHSPHPQSTSPEPQREALDLGLRTSPTSTSPLRHSSPSSGGSLQVKRDRDSHEPSALISHKRALSEDEGPHEKIPALPGTHIKISNRGDGRNGDNSLAVSMEINGMMYQGVLYAQSDNNNKSISMNNNNNKTRSLVSFKFSGES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00381633; iTF_01004853; iTF_01004004; iTF_00380089; iTF_00378513; iTF_01005797;
- 90% Identity
- iTF_00380089;
- 80% Identity
- -