Cglo018657.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- retn
- Assembly
- None
- Location
- Contig6868:17855-38084[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-22 3.1e-18 66.3 0.0 13 89 1 75 1 75 0.96 2 2 3.7 1.4e+04 -3.1 0.0 25 38 229 242 195 249 0.60
Sequence Information
- Coding Sequence
- ATGCAAAAACGTGGAACTCCAATCAATCGATTACCTATTATGGCAAAGTCTGTTCTTGACCTGTACGAACTATATAATTTAGTGATTGCCCGAGGTGGTTTAGTAGACGTAATAAACAAAAAATTATGGCAAGAAATTATAAAAGGCTTACACCTGCCCTCGAGTATTACTTCTGCTGCGTTCACTTTACGTACACAGTACATGAAATATTTATACCCGTACGAGTGCGAGAAGCGACGACTATCGACACCAGCGGAGTTGCAGGCGGCGATAGACGGGAATAGACGGGAAGGACGTCGCAGCAGTTACGGAGCCTACGGAGGAGGTAGTGGTGATAACATGATATCACGCACCCCGAGCACACCTGGTTCATTGGCACTGCATGCACAAATGTCACCGCTATCTTTAGTATCTGCGTTGGGGCAGCACCACGGGGCTCAGGCGATCGCTAACGGCAGCACAGCACACACACCTCTGCCATACCATCCTCATCATCCCCAACATCAGCAAGCCGCCGGGCTGATGGCGGGTGGACCGCCGGCTGATTTTGACGCTCGCGTAACAGACTATCTGAAAATGCTACACCGAGACTTTCACCGTGGCACAGGAGCAACCTCGCCGCCGATGACGCTGAAGCACCAGGGTTCCCCAGAAGATACGCCCCCGCGCGACACAAGAGAGGCGCTGATGGAGATGTCGAAGCTGACCCTGTGGAACATGTACAACCCTTTGTACGGAGGACTGGCCCAGCCGCCGGTGTCACCGCAGACCTCGCACTCGCCGCACCCGCAGTCGACGAGCCCAGAGCCGCAGAGAGAAGCCCTCGACCTGGGGCTCCGCACATCTCCAACCTCGACGTCGCCGCTCCGCCACAGCTCGCCCTCCTCCGGCGGAAGTCTCCAAGTAAAGAAAGACCGGGACTCCCACGATCCCTCCGCATTCATCTCCCACAAACGGACCCTCTCCGAAGACGAGGGGCCTCATGAGAAAATCCCCGCCCTTCCCGGGACTCATATCAAGATCTCGAACCGCGGAGACGGCAGGAACGGCGACAACTCCCTCGCCGTCAGCATGGAGATCAACGGAATGATGTACCAGGGTGTTCTTTACGCACAAAGCGACAACAATAATAAATCTATCAGTATGAATAATAATAACAACAAAACAAGGAGTTTAGTATCGTGA
- Protein Sequence
- MQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGSGDNMISRTPSTPGSLALHAQMSPLSLVSALGQHHGAQAIANGSTAHTPLPYHPHHPQHQQAAGLMAGGPPADFDARVTDYLKMLHRDFHRGTGATSPPMTLKHQGSPEDTPPRDTREALMEMSKLTLWNMYNPLYGGLAQPPVSPQTSHSPHPQSTSPEPQREALDLGLRTSPTSTSPLRHSSPSSGGSLQVKKDRDSHDPSAFISHKRTLSEDEGPHEKIPALPGTHIKISNRGDGRNGDNSLAVSMEINGMMYQGVLYAQSDNNNKSISMNNNNNKTRSLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00380864;
- 90% Identity
- iTF_00378513; iTF_00381633; iTF_00380864;
- 80% Identity
- -