Cglo019251.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- -
- Assembly
- None
- Location
- Contig20426:2626-10702[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 4.8e-06 0.00051 20.7 1.0 1 23 162 184 162 184 0.98 2 32 0.0037 0.4 11.6 1.7 1 23 207 230 207 230 0.94 3 32 0.00046 0.049 14.4 0.8 2 23 237 259 236 259 0.96 4 32 0.00023 0.024 15.4 0.6 1 21 278 298 278 299 0.95 5 32 0.0043 0.46 11.4 0.1 3 23 391 411 389 411 0.95 6 32 0.00045 0.048 14.5 2.6 1 23 417 440 417 440 0.96 7 32 9e-05 0.0097 16.7 0.1 1 23 498 521 498 521 0.96 8 32 0.0037 0.4 11.6 0.5 1 23 527 550 527 550 0.96 9 32 0.11 12 6.9 1.9 1 23 563 585 563 585 0.97 10 32 3.1e-05 0.0033 18.1 1.1 3 23 634 655 633 655 0.96 11 32 4 4.3e+02 2.0 0.3 1 23 686 709 686 709 0.83 12 32 0.004 0.43 11.5 1.2 2 23 716 739 715 739 0.93 13 32 2.4 2.6e+02 2.8 0.0 2 23 748 770 748 770 0.84 14 32 0.22 24 6.0 0.0 2 23 777 799 776 799 0.94 15 32 9.9e-06 0.0011 19.7 1.2 1 23 807 829 807 829 0.98 16 32 0.081 8.8 7.4 0.3 2 23 863 886 862 886 0.92 17 32 0.00016 0.017 15.9 3.3 1 23 889 912 889 912 0.97 18 32 0.00072 0.078 13.8 0.5 2 23 919 941 918 941 0.95 19 32 0.0012 0.13 13.1 5.2 1 21 967 987 967 988 0.95 20 32 0.0021 0.22 12.4 1.8 2 23 1002 1023 1001 1024 0.93 21 32 0.29 31 5.6 1.0 1 23 1027 1050 1027 1050 0.94 22 32 0.0059 0.63 11.0 1.2 2 23 1057 1080 1056 1080 0.91 23 32 0.73 79 4.4 0.2 2 23 1087 1109 1087 1109 0.95 24 32 3.9 4.3e+02 2.1 0.0 2 23 1116 1138 1115 1138 0.91 25 32 0.17 19 6.3 2.7 2 23 1147 1169 1147 1169 0.96 26 32 1.7 1.8e+02 3.2 1.7 2 23 1175 1197 1175 1197 0.92 27 32 0.15 16 6.6 0.0 1 23 1253 1276 1253 1276 0.94 28 32 0.0025 0.26 12.2 2.8 1 20 1302 1321 1302 1323 0.95 29 32 0.38 41 5.3 1.3 2 23 1422 1444 1421 1444 0.94 30 32 0.65 70 4.5 0.8 2 23 1451 1473 1450 1473 0.95 31 32 0.13 14 6.7 1.8 1 23 1484 1506 1484 1506 0.97 32 32 0.024 2.6 9.0 0.1 3 20 1515 1532 1515 1534 0.96
Sequence Information
- Coding Sequence
- ATGTATAATCTGGAAAATTTTTACGATTTTCGAACGGCTTGCGTTAATGCTGTCGCGCTTTTGGAAAGAAAATTACCACCAAAAGAATCTTCAAGCAGTGGATTACATAATGACATGGAAAAACATTCAGAGTTGCGCTCAGAGTTACTTAAGGAAAAAGAAAAGATGCCAATTCTTATACCTGAAGCACCAATAGTTAATCCGAATGCCGCGTTGGGTACTCCACCGAGATTAAATTCTGACGGTGAAGCCGATCAGGAAATTGAAGAAATTCTTGAACACAGTGGAACTGAAGAAGGCTTAGAAGATGGCGAGGACAGAAAATATGACGAGGAGTACGAAATGGACATGGAGACAAACCCCAGTGATTTTTTGGAAATGCCTCCGATGGTAACAGAAGACCTAGAAGAGCCCGACCCGCACCAGCAGAACTCATCTCGCTCACCAGCGTTGTTCCAACACAAATCCGAGCACCACGAAGTCTACGTATGTTCATTATGCAACAAAGCCTTCAGCTCCAAAGGCCACCTGTCACTGCACGCGCGAATTCACGCCGGAGCCGGAGACGTAGTGGGTGAAAAGGTAATCACAGACGACCACACATCGTTCAAGCGTCTGTACCAATGCGACCTCTGCAACAAATCCTACTCAACAGCCAAGCACCGGTGGGGTCACGTGTCTTCAAATCACCGAGGACACCCAGCAGTAACGTGTCAATACTGCTCACGTTTGTACTCGACACGTGGAAATCTAATGGACCACATAAAGTCTCGCCACACTGGCCAGCCTCCGCCTCCTAAACTCGGTGTCTATGTCCCCTCAGACAATCGATTTCAGTGTAACACGTGCCCGAAGATGTACACCAACATCACCGACTTGAACAAGCACAAAAAAGTCTGCACTGGAATCCGCGAATCAATAAGCTTGCTGCTAAAAAAGAAGGGCAAGAGTCTTATGGACACCTCAGAAGCTTCGAGCTTTGAGTCTGACGAAGACAGCAAAGATTACCGCACAGCCGAGGCTAAATTATCAAAAAATCCCCAGCTGACTATTTTAAAGCAAGCTTTGACTCGCGGAGCCGAAGGACTTAAGCGTGACGACCGCGATCCTTATAAATTACTAAGAGTACCTCAAGTTGACACTCAAGATTCCGAACCCAAGAGATGGTTTTGCGAAACTTGTCCTCAGTCTTTTACTTCAATTGAAGCTCTAAAAGACCACGAGGTCACTCACGAGTCCGACAAACCTTTCATTTGTCTTCTCTGCAAAAAACATTTCACACTAAAATCCTCTTTAAGTCGGCATATTATTTCCTCCCACGGTGTAGACCCAGCTCCAATGTTAGACGATGAAAAATGTCTGAAAAAAAAATTGCCTGTAAATAATCTACGTGAAGAAATTAAAATAAAACGCGAGCCTTGTTTTTCTCCTGTCAATGTTGACGAAGAAGATGAAACTCAGCAGCAAGATATGATTGAGATAGAAACAGTATTTGTATGTGAAATTTGCACCCGTGATTTTAACGACCGAGCTTCTTTATGGCTGCACATACGCGCTACTCACAAAGAATACGCAGCATTTGCTTGTGGAGTGTGTTTAAAAATCTGTACGGACAATGATCAATTGTTGAACCACGTAAATATGTACCACGGAGCTTCTAAGCTTCAAATATCAGAACAAAGGCGCTACAGTTGTACCATTTGTGGCAGACAACATGACTCAAGGAAGAAATTAATGACGCATGTGTCGATTCACAATATAGATCCTTCCTATGATCCAGCTAACTTTGTTCAATTAAACAGCGGGTATTACAGCAATGAGAATATGAATGACACCACTCAGGATCATCTTAGATTAAAGTCTGTTGATTTTGATCATGAGGACGGTGAAAAGGTAGATTGTTTTATCTGCTACAAGTCTTTTCCAAATGAAGACCACCTAATTCGCCACCAGCGCAACGCGCATAAAGAACAGACTCCTTATACTGATAATAATCTTGCTGTTAATTCCAGTCCTGCTAACCCAAATGGGAACAAAGCGCAGTATCACTTATTTTTCGTGTGTGAAATTTGCGGAAGTTCTCATCCAAGTAAATGGGAGCGCTGGTTACACATCAGCAGTTTTCACAGCTCAGAAAGCCAAATTAGATGCGAGCGTGAGGATTGTGGTAAAATATTTTCTACCAAGTCGCTTAAAAATGAACATGCTCAGCATCATATTTTGCAAGGCGCTTCGCCTAATACTTGTGAAATTTGTGGAAAACTTTGGGGCAGCCGGGTCGATTATTGGAAGCATGTTATGGGAGTTCATTCCGACACTGTTCCTCTAATTTGCGGTGTTTGCTTGAAAGTCTTCCCGGATGTTATTCAATTAAGCGGTCATGTTAAGAGTAAGCACTGGCCGCTGACAAACGGGGACTTTAGTTGCGACATTTGCGGTCGTCCTTATTCAAATAAATCTAAAATGTCGCGCCACCGTAAAATTCATGGGTTAGAAGTTGAACATTACAGCAATGGCGTTAACGAGTCAGTAAGTGAAGTCATACCTGCTAGTACGTATGAAAGTAACGCAGCTGAGGTTGATTTGACTTGTGAAATGTGCACGGACTTGATATTTCCAAGTTGGGAAGACTTGTGCCAGCACAGAAGAATAATCCACGGATTATTCCCGTGTGATTTGTGTAACAAATGCTACGGAAGGACTTCTCACCTTTGGAAGCATGTTAATCGAGTCCACAAAGGTCACAAGGACGTTACTTGCAAGTATTGTTTAAAAACGAGCGCTTCTAAGGATCATTTAGCGGCGCATATTGCTAAAATTCACCGCTACGAGCCCGAAAGCAAGAAAGTTCTTAAAGAAACTAATTATAAAGCCCCCGTTGTTGAAGAAGACACGATTCATCATTGCGAAAAGTGCAACAAAGCTTTCCACAAGCGGTATTTATTGAAGAGACACATGAAAGGTTGCCAAAATTATCGGAAGGATCCCGGAGCGTTGTTGACCCGTTGCAGAGCTTGCGAGAGAATTTTTAAGGACCGGGCGAGCTTGCAGAAGCACATTGAGAATCATCACAGTAGTTACACATGCCATTTGTGTAATGAGACGATTACTTCCAAGCTTGGAATTATGTCTCACAATCGTGTTAATCATATGAACCATCCAGACTTGACTTGTGACCATGCGAGCTGTAAAAAATTGTTCCGGACTAAGGAAGATCTTGAAGCTCATCTGAAGGATCATAAATATCACTCGCCGAATGTTTGTGATTTTTGTGGAGATACTGTGGAGAATAAATTGAAATTAAAAATGCATATTTTGTCACTGCACCGGAATGAAATTGGGGTTTCTTGTGGGGTTTGTTTGATACCGATGAAAGATCCGCAGGAGTTGAAGAATCATGTGGAGAGTGTTCATCCTGGAGTTTTGTTAAAGGCAAATACTTGCCAGGTTTGTGGGAAACAATATGCTTCTAAGTGGAAGGCTTTTGATCATACGAAAAAATGCCATGGAAAAGTTTTTAGAACTTGTAAACAATGTTTGGCTGTTTTTACAACTGACGCGGATATCAGACATCATTACGAGCATGTTCATAATGTGCGTAAGGATCAATTGGCGGGATTTGAAAATAATTCTGATGGTGGTAAAGGAGGGGGTAATGATGATGGAATTAAAGAGGAGCTTGATGATTTTTATGATGATGTTTATGATGAATTACCGAAGGTTAATAAGTCGGCTAAGCGCAAACCTCAAGATACTTATGATTGTGAAATTTGTCCGGAGATATTTTTAAATTATGAAACTTTAGCTGATCATTATCAATTGATTCATAATACCGATCCTGAGAGGATGTTTAAAAAAATGAAAACTAATAGTGGTAAAAAACGAATGCGTAATCGTGAAAATTTTGAATGTGAAAATTGTAAAAAACAATTTTGTACTAAAACATTATTTTGGAATCATATCAGTAATTGTACGCGTAAAAATAATTTATCAAAAAATAATAATGATAATACAACTACCTCGATACTTGAAACGCATTTAAAAAATAATAATATGATTAAAAAGGAGCCTGTTGATATTATAAATGAGTCTAATTTAAATATTCCTGATTTTAATTTATTTGAAGATATTAATTTGCAATTATCTGGACACAAACCAGTGCCAAATTTAATGCCATTGTCTTCATCTCACCGGATGTCCCCGATGAAATGCAACCGCAAGGATTCTAGAAAGGTTTATGATGAGTCTACTAATACAGTGTGTGCTTGCGAGGTTTGTGGGAAACAGTGGCCAGCTAAGAAGCACCTCTGGCAGCATTTGATACGCTTTCATAGAGCTGAGGCAGCTGTTACTTGCGGAGTTTGTTTGAAATTATGCACGACTTATCGCGGGTTGTCGCAGCATCTCAAAGAGGCTCATGAAGCTATTTTGTCTTGTGAGGGGAATAATTTTACATGTAAGATTTGTGGGAGGTATCATAATGCTAGGAGCAAGCTGTTGCTTCATATGAGCATTCATATTAATAATAATGAGCACATTTGGTGCTCTAAATGTGCGCTTAGTTTTGATAGCAAGGAGAAACTTGAAGCTCATATGGCTAATTGTATTGTTAATAAGCAGAGGAGAGATGAAGATGGCAATGAGAATGATAATGataatgacaatgataatagtaatggaaaaatgataatgataatGATGAAGATGAAGAAAATGAAGATCATGAAGAAAAAAGCGGGGATGAAGATGTTAAAATTGATGATGATAAAGGAAGCTTGA
- Protein Sequence
- MYNLENFYDFRTACVNAVALLERKLPPKESSSSGLHNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEGLEDGEDRKYDEEYEMDMETNPSDFLEMPPMVTEDLEEPDPHQQNSSRSPALFQHKSEHHEVYVCSLCNKAFSSKGHLSLHARIHAGAGDVVGEKVITDDHTSFKRLYQCDLCNKSYSTAKHRWGHVSSNHRGHPAVTCQYCSRLYSTRGNLMDHIKSRHTGQPPPPKLGVYVPSDNRFQCNTCPKMYTNITDLNKHKKVCTGIRESISLLLKKKGKSLMDTSEASSFESDEDSKDYRTAEAKLSKNPQLTILKQALTRGAEGLKRDDRDPYKLLRVPQVDTQDSEPKRWFCETCPQSFTSIEALKDHEVTHESDKPFICLLCKKHFTLKSSLSRHIISSHGVDPAPMLDDEKCLKKKLPVNNLREEIKIKREPCFSPVNVDEEDETQQQDMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICTDNDQLLNHVNMYHGASKLQISEQRRYSCTICGRQHDSRKKLMTHVSIHNIDPSYDPANFVQLNSGYYSNENMNDTTQDHLRLKSVDFDHEDGEKVDCFICYKSFPNEDHLIRHQRNAHKEQTPYTDNNLAVNSSPANPNGNKAQYHLFFVCEICGSSHPSKWERWLHISSFHSSESQIRCEREDCGKIFSTKSLKNEHAQHHILQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSGHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEVEHYSNGVNESVSEVIPASTYESNAAEVDLTCEMCTDLIFPSWEDLCQHRRIIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCLKTSASKDHLAAHIAKIHRYEPESKKVLKETNYKAPVVEEDTIHHCEKCNKAFHKRYLLKRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMSHNRVNHMNHPDLTCDHASCKKLFRTKEDLEAHLKDHKYHSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVESVHPGVLLKANTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVRKDQLAGFENNSDGGKGGGNDDGIKEELDDFYDDVYDELPKVNKSAKRKPQDTYDCEICPEIFLNYETLADHYQLIHNTDPERMFKKMKTNSGKKRMRNRENFECENCKKQFCTKTLFWNHISNCTRKNNLSKNNNDNTTTSILETHLKNNNMIKKEPVDIINESNLNIPDFNLFEDINLQLSGHKPVPNLMPLSSSHRMSPMKCNRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRGLSQHLKEAHEAILSCEGNNFTCKICGRYHNARSKLLLHMSIHINNNEHIWCSKCALSFDSKEKLEAHMANCIVNKQRRDEDGNENDNDNDNDNSNGKMIMIMMKMKKMKIMKKKAGMKMLKLMMIKEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00379812;
- 80% Identity
- -