Cfla002347.1
Basic Information
- Insect
- Cotesia flavipes
- Gene Symbol
- KLHL3
- Assembly
- None
- Location
- scaffold:40716-43751[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-08 7.8e-05 22.3 0.0 2 43 206 247 205 249 0.92 2 4 5.8e-12 5.9e-09 35.4 0.1 3 44 257 298 256 299 0.86 3 4 0.16 1.6e+02 2.0 0.0 21 33 326 338 312 343 0.71 4 4 1.3e-12 1.3e-09 37.5 0.1 4 39 370 405 369 410 0.92
Sequence Information
- Coding Sequence
- ATGACTGAAATTGTTGATCAGACGGACAACAATGTCGGAGAATACGTTTTCACGTGGATTACTTACAAAGATGATATTCCAAGGTTTATGTACCAATTATTCAATAATGAATCACTTGTTGACGTGACGCTCTGTGTTGCTGGTGAACGTATTCAAGCTCACCGTCTCATCCTCGGTGCTTGCAGCGATTTATTTAGAGATGTGTTAAAAGAAGCTCCTGAAGACCACCCGACTCTTATAATTAATGACGTTTCAGCCGAAACTATGAAAGCAATAATTGAATTTTGTTATACCGGGAATGTCAAAGTTCCTCCCGCAGGGACTAGAAGTTTATTTGAAGCTGCTAGGTTTTTACAAATATCAGCACTGATGGAGACAGCAGACCCTGAATTTAAAAATGAAGATGAGTATCAATTAATAGATTCTTTGGATGTGTCTAATGAAGTTGTAGAAAATAATTGGGAAATAGAAAATGAAAATTTTGCGGCTGAAGGTGTGACATATACTGAGGAAGTAGAACAAATAAGTACTGTTAAGGAAGAAGAAGTTAAATCAGAGAAAAAAAAAAGTAACAAGACGAAACGCAAACGAGAGAACGCCAAAAGAGATTACAACCCTGCGAACATGGAAGCTGCATTGAATGACTTGAGCCAGGGGTTGTCTTTAGTTGAGGCTTCTACCAAAAATAATGTGGCCAGGTCGACACTCTACATGAGGTGCAAAGCTCTAGGAATGCAACTGAACACCTCCAGACACGATTATCCTGCTGAGCGACTCAAAGCGGCTATCAATGCTGTCATGAATGGAGCCAGTTTTCAAAGTGCATCTGACAGATACAAAATACCTAAAACTGTCTTGTGGAGGCGGATTCAAAAAGAAAATTATCGCTCGATGAGGCCTGATTGCAAACGGGCTTATGATGCTCGCAAAAGAGAAGCTGCTGTTAAAGCTTTGGCTAGAGGGGAAAATCTTACCAAAGTTTCTTTGGAGTTTCAGATTCCAAAAACGACATTGTTTCGTGATAAGACAAAATTAGTGGACCAAGGAAAATTACCGGAATCATTTTGGAAAAAACGTAAAACCGAAGACGAGCATATAAAAAAAATGCGCCTTGAAGAAGCGGTCACCGCTTGCTTGCAAGGAAAAATGTCTCAGGCAGCTGCTTCAGTGGCTTATCATATTCCAAAAACTACAATTTGGCGGCGGCTTCAGCAGGAACATAGAAAAATGGATAAAAACTTTGTCACTAAAAGAAGAGTACGTTCTATTCAACAGGCAGATGTTAAAGTTGAGAGTCTAAAAGATTCTGAACTTACGATGTGTAATGACTCTTCGGATATTCCAATGACGTACATCAATGAAAATAACGTCGAAGAGTCTATTATTATTCTAACTAAAGAAGAAGTTGAAGGCCTTAATCTCGATGATAGTCAACAAATTATTGTCAGCACGGTATAA
- Protein Sequence
- MTEIVDQTDNNVGEYVFTWITYKDDIPRFMYQLFNNESLVDVTLCVAGERIQAHRLILGACSDLFRDVLKEAPEDHPTLIINDVSAETMKAIIEFCYTGNVKVPPAGTRSLFEAARFLQISALMETADPEFKNEDEYQLIDSLDVSNEVVENNWEIENENFAAEGVTYTEEVEQISTVKEEEVKSEKKKSNKTKRKRENAKRDYNPANMEAALNDLSQGLSLVEASTKNNVARSTLYMRCKALGMQLNTSRHDYPAERLKAAINAVMNGASFQSASDRYKIPKTVLWRRIQKENYRSMRPDCKRAYDARKREAAVKALARGENLTKVSLEFQIPKTTLFRDKTKLVDQGKLPESFWKKRKTEDEHIKKMRLEEAVTACLQGKMSQAAASVAYHIPKTTIWRRLQQEHRKMDKNFVTKRRVRSIQQADVKVESLKDSELTMCNDSSDIPMTYINENNVEESIIILTKEEVEGLNLDDSQQIIVSTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379756; iTF_00381752; iTF_00382006; iTF_00377913; iTF_00378148; iTF_00380476; iTF_00380205; iTF_00378655; iTF_00378984;
- 90% Identity
- iTF_00379756; iTF_00381752; iTF_00382006;
- 80% Identity
- iTF_00379756;