Cglo015372.1
Basic Information
- Insect
- Cotesia glomerata
- Gene Symbol
- -
- Assembly
- None
- Location
- Contig111416:49-6514[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-07 0.00016 21.7 0.0 2 41 208 247 207 251 0.87 2 4 5.8e-12 6.4e-09 35.7 0.1 3 44 259 300 258 301 0.86 3 4 0.19 2e+02 2.1 0.0 21 33 328 340 314 345 0.71 4 4 1.6e-12 1.8e-09 37.5 0.1 4 39 372 407 371 412 0.93
Sequence Information
- Coding Sequence
- ATGACTGAGATTGTTGATCAGACCGATAACAATGTCGGAGAATACAATGTTTTCACGTGGATCACTTACAAAGATGATATACCAAGATTTATGTACCAATTATTCAATAATGAATCACTTGTTGACGTGACGCTCTGTGTTGATGGTGAACGGATTCAAGCTCACCGTCTCATCCTCGGTGCTTGCAGCGATTTATTAAGAGATGTGTTGGAAGAAGCTTCTGAAGACAATCCGACTCTCATAATTAATGACGTATCAGCCGAAACTATGAAAGCAATAATTGAATTTTGTTATACCGGGAATGTAAAAGTTCCTCCGGCAGGGACCAGAAATTTATTTGAAGCTGCTAGGTTTTTAAAAATATCTGCACTGATGGAGTTTCAGACAGCAGACTCTGATTTTACAAATGAAGATGAATATCAATTAATAGATTCTTTGGATGCGTCTAATGAAGTCGTGGAAAATACTTGGGAAATTGAAAATGAAAATTATGAGGCTGAAGATGTTACATATACTGAAGAAGTAGATATGAGTACTGTTAAGGAACAAGAAGTTAAACCAGGAAAGGAAAAAGGTAAAAAGACAAAACGGAAACGTGAGAACCCCAAAAGAGATTACAACCCTGCGAATATGGAAGCTGCATTGAATGACTTGAGCCAGGGGTTGTCTTTAGTTGAGGCTTCTACAAAAAATAATGTGGCCAGGTCGACACTCTACATGAGGTGCAAAGCTATAGGAATGCAACTGAACACCTCCAGACACGATTATCCTGCAGACCGACTTAAGGCGGCCATCAATGCTGTCATGAATGGAGCCAGTTTTCAAAGTGCATCTGATAGGTACAAAATACCTAAAACTGTCTTGTGGAGGCGGATCCAAAAAGAAAATTATCGCTCGATGAGGCCTGATTGCAAACGGGCTTACGATGCTCGCAAAAGAGAAGCTGCTGTTAAAGCTTTGGCTAGAGGGGAAAATCTTACCAAAGTTTCTTTGGAGTTTCAGATTCCAAAAACAACATTGTTTCGTGATAAGACAAAATTAGTGGACCAAGGAAAATTACCGGAATCATTTTGGAAAAAACGTAAAACGGAAGACGAGCATATAAAAAAAATGCGCCTTGAAGAAGCGGTCACCGCTTGCTTGCAAGGAAAAATGTCTCAAGCAGCTGCTTCAGTGGCTTATCATATTCCAAAAACCACAATTTGGCGACGGCTTCAGCAAGAACAGAGAAAAATGGACAAAAACTTTGTCACTAAAAGAAGAGTACGTTCTATTCAACAGGCAGATGTTAAAGTTGAGAGTCTGAAAGATTCTGAACTTACGATGTGTAATATTTATGTACAAGAGAGAAGTAATGAGTTTGCAATAGTGTAG
- Protein Sequence
- MTEIVDQTDNNVGEYNVFTWITYKDDIPRFMYQLFNNESLVDVTLCVDGERIQAHRLILGACSDLLRDVLEEASEDNPTLIINDVSAETMKAIIEFCYTGNVKVPPAGTRNLFEAARFLKISALMEFQTADSDFTNEDEYQLIDSLDASNEVVENTWEIENENYEAEDVTYTEEVDMSTVKEQEVKPGKEKGKKTKRKRENPKRDYNPANMEAALNDLSQGLSLVEASTKNNVARSTLYMRCKAIGMQLNTSRHDYPADRLKAAINAVMNGASFQSASDRYKIPKTVLWRRIQKENYRSMRPDCKRAYDARKREAAVKALARGENLTKVSLEFQIPKTTLFRDKTKLVDQGKLPESFWKKRKTEDEHIKKMRLEEAVTACLQGKMSQAAASVAYHIPKTTIWRRLQQEQRKMDKNFVTKRRVRSIQQADVKVESLKDSELTMCNIYVQERSNEFAIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379534;
- 90% Identity
- iTF_00380476;
- 80% Identity
- iTF_00380476;