Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000591.1:393834-398512[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.9e-05 2.1 9.9 0.0 14 45 170 203 162 208 0.74

2 4 0.63 1.5e+04 -2.4 0.1 26 45 294 313 293 317 0.84

3 4 2.7e-06 0.064 14.8 0.0 21 46 372 397 366 403 0.90

4 4 0.043 1e+03 1.3 0.1 20 43 456 479 433 487 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.9e-05	2.1	9.9	0.0	14	45	170	203	162	208	0.74
2	4	0.63	1.5e+04	-2.4	0.1	26	45	294	313	293	317	0.84
3	4	2.7e-06	0.064	14.8	0.0	21	46	372	397	366	403	0.90
4	4	0.043	1e+03	1.3	0.1	20	43	456	479	433	487	0.80

Sequence Information

Coding Sequence: ATGGCGAGCCGAATACTATTTGAAGATGAAATTGATGaccaaaatctaaataaaactaacaaacCCAAACTGAATGAAGAAATGACAATAAAAGAAGAAGATCCAGCAGATGACGGTATCTGCAGTCCAGATCCTAGTCAAGGAAAAGAACACCAGGAGTTTACAGAAACTAATTCTGAAACAGTTAATACTACGGAGcctagtaataaaaatattgaaatagaaaatgtaatctttctcggcagtcgggtaaaaacaagtTATGAAGTTCCAATTGAGCAAGAGGGCAATATTGCTCAAGGTGAGGGTAATGTTATCATAGTTGGAGGGGGTAAAGttaagagaaaaaataaaagtgagCTGGAGTTGCTTGGTATAGATATAAAGGAGAATTATGAAGATTTAGACGCTGAATATGATGTGTTTGGAGatgaaagtaaaatatttagaaaGTATAAATTGAGGAAAACTGAGCAACCtATCTCATATAAGGAGCCAGAGGACATCAAACCCAAGCGCCGCATCAGTACAGATGATGAAACGGATTTGACATGTCCCGTTTGCTATCAAGAGTTTGAAAACAAGATGGCGTTACTGAACCACCTCCGAATCCATAACAAAACTGTACACGAATACACCTGCTCATTATGCTCCAAGAAATTCGAGAAAAATGCAGACTTAATTGCCCACAGAGAAAAACATAGCTCAGAGTCTTTTCTCTGTCAGGAATGCAAACTAGCATTTTCAAACTACTGCGATTATTTACTACACAACTATGAGCATTTGAGCCAACCCCATTTCAAATGCCAAGAATGTGGACTACGCTATCGAAAATCAGTCTATAAAAAACACATTATGACTCATTTTAAAAATCTACTGTCCTGCGACTTATGCTCTTTCGTTGCCAACGGCGAATACAAGTTACGGGCTCATATAAATCAGCATAAATACGTGGGATTTGTCTGCGTAGAGTGTGGAAAAGTGTGCAAATGCAAAAAAGATTATGAATATCATATGAGCATGCATACTGGGGTTAAGAGGATCCAGTGTCTTTACTGCGGAGCATGTTTTCGCAACCTTAGCGCGAGGCAAGTGCACACTAGAATACACACAGGTGAAAAACCTTTTACTTGTGACATATGTGGGCTCAAAGTTAGGCAATGGACAGATTTGAAACGACATAAAGAGACTCATAGCACGGAGAAAAAGTACGCCTGCGATTTGTGTGGAAAGAAATACTTGCACAAATATTATCTTGTGATTCATATGCGGTCTCATACAAATAAGTATTTGTATGAGTGTCCAGAGTGTGATGCTAAGTTTGTCGGTGTGGCTGGGTTGAAGACTCATACGATGTTTAAGCATATGAGTGAGCGCCCTATTGAGTGTACGCTTTgtgataaaaagtttattaataataatcagtATCGGAAACATTGTAGGGCAAAGTATCATTTAAGAAATGTGTATGGGAATAATACTGATAAAAAGAAGAAAGATGAATAA
Protein Sequence: MASRILFEDEIDDQNLNKTNKPKLNEEMTIKEEDPADDGICSPDPSQGKEHQEFTETNSETVNTTEPSNKNIEIENVIFLGSRVKTSYEVPIEQEGNIAQGEGNVIIVGGGKVKRKNKSELELLGIDIKENYEDLDAEYDVFGDESKIFRKYKLRKTEQPISYKEPEDIKPKRRISTDDETDLTCPVCYQEFENKMALLNHLRIHNKTVHEYTCSLCSKKFEKNADLIAHREKHSSESFLCQECKLAFSNYCDYLLHNYEHLSQPHFKCQECGLRYRKSVYKKHIMTHFKNLLSCDLCSFVANGEYKLRAHINQHKYVGFVCVECGKVCKCKKDYEYHMSMHTGVKRIQCLYCGACFRNLSARQVHTRIHTGEKPFTCDICGLKVRQWTDLKRHKETHSTEKKYACDLCGKKYLHKYYLVIHMRSHTNKYLYECPECDAKFVGVAGLKTHTMFKHMSERPIECTLCDKKFINNNQYRKHCRAKYHLRNVYGNNTDKKKKDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00623438;
90% Identity: iTF_00374518;
80% Identity: iTF_00374518;