Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000512.1:123548-127085[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00061 0.072 14.9 3.5 1 23 10 32 10 33 0.95

2 24 3.8e-05 0.0045 18.7 0.9 1 23 37 60 37 60 0.94

3 24 0.14 16 7.5 0.3 2 23 63 85 62 85 0.95

4 24 0.054 6.3 8.8 1.3 2 20 91 109 90 114 0.91

5 24 0.0057 0.67 11.9 3.0 2 23 159 181 158 181 0.92

6 24 2.2 2.6e+02 3.7 0.1 2 23 210 232 209 232 0.94

7 24 0.012 1.4 10.8 0.1 1 23 254 277 254 277 0.92

8 24 9.2e-05 0.011 17.5 0.9 1 23 282 305 282 305 0.94

9 24 1.2 1.5e+02 4.5 0.1 1 15 311 325 311 326 0.86

10 24 0.0025 0.29 13.0 3.2 1 23 360 382 360 382 0.96

11 24 0.033 3.9 9.5 0.1 3 23 411 432 411 432 0.96

12 24 0.008 0.95 11.4 1.9 1 23 452 475 452 475 0.96

13 24 3.4e-05 0.004 18.9 0.5 1 23 480 503 480 503 0.96

14 24 0.0013 0.15 14.0 0.8 1 23 508 531 508 531 0.96

15 24 0.00068 0.08 14.8 1.1 3 23 535 556 534 556 0.96

16 24 0.026 3.1 9.8 1.2 2 20 564 582 563 584 0.93

17 24 0.0083 0.98 11.4 3.3 1 23 639 662 639 662 0.94

18 24 0.78 92 5.1 0.0 2 23 735 758 734 758 0.94

19 24 1.6e-05 0.0019 19.9 0.1 3 23 765 786 764 786 0.94

20 24 0.0028 0.34 12.8 2.8 2 23 791 813 790 813 0.94

21 24 0.009 1.1 11.3 5.1 1 23 818 841 818 841 0.96

22 24 2e-05 0.0023 19.6 5.0 1 23 845 868 845 868 0.97

23 24 0.00023 0.027 16.3 0.3 2 23 875 896 874 896 0.96

24 24 8.2e-06 0.00096 20.8 0.6 1 23 902 924 902 924 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00061	0.072	14.9	3.5	1	23	10	32	10	33	0.95
2	24	3.8e-05	0.0045	18.7	0.9	1	23	37	60	37	60	0.94
3	24	0.14	16	7.5	0.3	2	23	63	85	62	85	0.95
4	24	0.054	6.3	8.8	1.3	2	20	91	109	90	114	0.91
5	24	0.0057	0.67	11.9	3.0	2	23	159	181	158	181	0.92
6	24	2.2	2.6e+02	3.7	0.1	2	23	210	232	209	232	0.94
7	24	0.012	1.4	10.8	0.1	1	23	254	277	254	277	0.92
8	24	9.2e-05	0.011	17.5	0.9	1	23	282	305	282	305	0.94
9	24	1.2	1.5e+02	4.5	0.1	1	15	311	325	311	326	0.86
10	24	0.0025	0.29	13.0	3.2	1	23	360	382	360	382	0.96
11	24	0.033	3.9	9.5	0.1	3	23	411	432	411	432	0.96
12	24	0.008	0.95	11.4	1.9	1	23	452	475	452	475	0.96
13	24	3.4e-05	0.004	18.9	0.5	1	23	480	503	480	503	0.96
14	24	0.0013	0.15	14.0	0.8	1	23	508	531	508	531	0.96
15	24	0.00068	0.08	14.8	1.1	3	23	535	556	534	556	0.96
16	24	0.026	3.1	9.8	1.2	2	20	564	582	563	584	0.93
17	24	0.0083	0.98	11.4	3.3	1	23	639	662	639	662	0.94
18	24	0.78	92	5.1	0.0	2	23	735	758	734	758	0.94
19	24	1.6e-05	0.0019	19.9	0.1	3	23	765	786	764	786	0.94
20	24	0.0028	0.34	12.8	2.8	2	23	791	813	790	813	0.94
21	24	0.009	1.1	11.3	5.1	1	23	818	841	818	841	0.96
22	24	2e-05	0.0023	19.6	5.0	1	23	845	868	845	868	0.97
23	24	0.00023	0.027	16.3	0.3	2	23	875	896	874	896	0.96
24	24	8.2e-06	0.00096	20.8	0.6	1	23	902	924	902	924	0.98

Sequence Information

Coding Sequence: ATGAATGTCGCTCATCCAAATAATAGCTTTGAGTGTGCCGAATGTAAAAAGAACTTTAATAAAAAGAGGGATTTGGATTCGCACATAAGATTCCATCATAAGAAGTATCATTCTTGTACCAAATGCGATGAAACATTCCCAACAAACTCCGCATTACAGATTCATAGGTCTAACGCTCATTCTTCGACTTGTAACATCTGCTTCCAAGTATTTGCGTCAGACGGCAAGCGGTTAGCTCATCAGAAATCTGATCATGATTATAATCAGAGCCAATGTGGATTTTGCAATAAAGTTCTAACAACAAAGCAAGCCTTTATAAGACATGCTGCAAATTGCGAACATAAACCTCAGGAAGAAACTGTCATTATAGATGACGAAGACAAAAAAATATCCGTtaaagaaataagaaaaagtTTAGCATGCATCTTTAACATGACTACCGCACTTCCTTTCAAATTCTTTATGAATAGGTTACGATGCTTCTATTGCACGAAAGACTTCACCTCATGCGAAGATTTAAAACAACACTCATCGATAGAACATCCTCACTGCGATATATCCTTTAAATCTATGAGGTTAAGAAACAGATATGACGGTGTCCAAATCAAAGTTGATACTTCCTCTTTGTCTTGTAGACTATGCCAAGTCACCTTGCAAGATTTGAACGACTTGATTGACCATTTGAGCAAAGAGCATAAGGTGAAATGCGCCTTTTCTGTCGAGAGTAATCTGCAGCCGTTCAAATTGATCAAAGACAACTACCCTTGCCCTTTTTGCGGGGAAGTCTACAGATATTTCGGTGTGTTACTTAAACACGTTAGTGCATCTCATAACGGCAATAAACATATATGCATGTACTGCGGCAAAGCGTTCAGAACTGACCCTAATCTTAGAGCTCATGTTTCAAGACGTCACAAAATAGCTGATAATCACAAGTGCGGGAACTGTGATCTAGTTTTTGGGACTAATAATGGTCTGCCAGGGCCGTACGAAGGGTGTACCTCTGAGCGCCGACGGAAAAACTTGAAAATACTGTTCAACCACACTACGATCATGCCATTTAAATGGCGAGGCAAATACCTTTGCTTTTACTGCGGAAAAAACTATACCGAATACACAGAATTTCGAAAGCATACAAAATCCCACGGACTGTGCACCACTAAAGATTACTCCCTAAAACTAATCAAAGGAAATAACATCGAAATTAAAATCGACGTCTCAGAAATCGGTTGTGACATCTGCAATGAACCATTCAGCAGATTCGAAGAAATAATCGATCATTTGATCAGCAAACACAATATGgaatacaacaaaaatatcgaTATTCCCTTCCAGGAATATCGATTAGTCGATTTTCGATGTTTGCACTGCGAAGAACAGTTTTCTTATTTCGGATATTTGGTTAAACACGTTAATAACATTCACCCGCAGAACTGTTTCATTTGTGATGATTGTGGAGTTACTTTCAACAAGAAGAGGGACTTGTCTATACATTTGAGGAATTATCACAGACAAGGAGGGTATCCATGCGATTTGTGCTTGAAGAACTTCGAAACTCGCCTTATGTTGCGGAGGCATCAAAATAACATGCATTTTAGGCACTGTAAGAGCTGTGGTTTGCGTTTCGCGTCCCTTTctcttttacaaaaacatgTACAAGTTGATCATCCCCAAAATGAGAGCAATATGAAGTGCAGTTACTGCTCCAAAGAGTTCCACACTTCCTTAGGTTTAAGACAGCATGTAAGCAAATGTAAAGTCAAAATCATTTCTCAGGTCGAGCCCCCCCACACTTCTTTCCTAAACGACAGTAACATAGAACCTAAGAAAAAGCAGAACATACTACAAATAAGACAGAATATACAGTGTGTACTCAACATGTCGACCGCGGTGCCTTTTAAATTCTTTTCCAAGTACTCCTGCTTTTATTGCTCAAAGAAATTCGTTGAATTTGACGAGTTACGCCACCATACCAGTCTTGAACATCCTGTATGCGATTTGAAGTCCAAATGCATGAAGAAATGCAAAGGAGAAAGGATAGCTGTCAAAATTGACGTATCAGCATTAGCTTGTAAAATATGTTGCCTCCCTATGCCTAATTTAGAAGATTTAATCAACCATTTAATAAATGAACATAAAGCGAACTATGATACGTCAATTTTGGGCTGTTTAGAGCCTTTCCGAGTTATAAAAGACAACATGCCATGTCCTATATGCCCGGATACCGTCTTCCGTTACTTCGGCATTTTGCTTCGACATATGAACTCCGAACACAGCAACAACAACCGAATCTGTGACTTCTGCGGTCGAAGTTTCAGGAACGCAGCTAATCTAAATGTGCACATAACCTACGCACATACAGGTTCCTGCGAATGCGACATTTGTGGTGTCAAATACAAGAACCAGTGGTGTTTGGCGCGACATAGAGCGAGGACACACGATGCGAAAGACCACAAATGTCCAAAATGTCCCGAGCAGTTCCAATCACAGTACCATAAGCAAAAACACTTAATAAAAATGCATAATGTGGGCCATAAATGCAGTTACTGCGGGAAAATGTTTACGAGAAACTCTTTCATGAAAGACCATGTTAGGCGTACACATTTGAAAGAAAAGAACATTCCTTGCTCCATTTGTAATGAgaagttttttgataattatctcCTGAGAATGCATATGGTTAAACATGAGGGGGATAGGAAATTCAGTTGCACTGTTTGTGGAAAAGCCTTTTTAAGACGAAGTAATTTGAGCTCGCATATGGAGATGCATAAAAAGTATGGGCATGTGCAATTGCAGATTTAA
Protein Sequence: MNVAHPNNSFECAECKKNFNKKRDLDSHIRFHHKKYHSCTKCDETFPTNSALQIHRSNAHSSTCNICFQVFASDGKRLAHQKSDHDYNQSQCGFCNKVLTTKQAFIRHAANCEHKPQEETVIIDDEDKKISVKEIRKSLACIFNMTTALPFKFFMNRLRCFYCTKDFTSCEDLKQHSSIEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCQVTLQDLNDLIDHLSKEHKVKCAFSVESNLQPFKLIKDNYPCPFCGEVYRYFGVLLKHVSASHNGNKHICMYCGKAFRTDPNLRAHVSRRHKIADNHKCGNCDLVFGTNNGLPGPYEGCTSERRRKNLKILFNHTTIMPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNNIEIKIDVSEIGCDICNEPFSRFEEIIDHLISKHNMEYNKNIDIPFQEYRLVDFRCLHCEEQFSYFGYLVKHVNNIHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLMLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCSYCSKEFHTSLGLRQHVSKCKVKIISQVEPPHTSFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDVSALACKICCLPMPNLEDLINHLINEHKANYDTSILGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLSSHMEMHKKYGHVQLQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447460;
90% Identity: iTF_00375556;
80% Identity: -