Cpyr025075.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000929.1:164753-165670[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 5.9e-06 27.3 0.0 1 38 15 52 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATAACCGTAAAACTGATCGCCAATCCTGGAGTGAGGAATCAATGCGTAAAGCTATAGAAGCAGTGCTCAGTAATAAAATGGGCTGGCTCTTGGCGTCTAAAACTTTTGGAGTGCCACAAGCAACTCTCAGAAGACATGCTTCGAATAGTAACAAAACTTTGGAGTCCAGTGCAAAGGGTCTAGGATCTTGGAAAGCTACTTTTCCTCCTGATGTGGAAAGAAAATTAGTTGAGCATTTGAAATTACTTGAATCTCGTTTGTTTGGACTGACGCGAGCTTCTGTTCAAGAATTAGCTTTTAATATGGCTGAAAGAAACGGTTTCGCTCATAGATTTAACCCACAAAAACAGAAAGCTGGACAAGAATGGTTAGAAGGATTTTTAAgacgaaataaagatatttctcTACGCAAACCAGAAGCTACTTCAGCCGCTCGTGCTCAGGCTTTTAATCGGCCACAAGTCAAAAAGTTTTTCGAGATATACGGAAATCTGCTGGAATCTGAAAACATTGGGCCACATCGAATTTATAATGCTGACGAATCAGGCCTGTCTACTGTACAAAAACCCCAAAAGATATTGGCTACTGCTGGCAGGAAGCAAGTTGGCGTAATAACTAGCGCAGAACGTGGAACCAACACcactgttgtttgttgtgttaatgCTGTTGGTACGTTTGTTCCGCCGATGATGATATTTTCgaggaaaaatatgaaaaatgaacTGGTAGATGAAGCACCTCCTGGCACTTTAGGTGTAGCTCAACCATCAGGATGGATGACAACAGATTTATTTCTGAAATGGCTTAAGCACctccaaaattttgttaaatctTCCATTGACGATAAAGTTATATTGATTGTCGACGGGCATGCAAGTCATAAAGGGATTGAAACTTTAGAATAG
- Protein Sequence
- MPRNYNRKTDRQSWSEESMRKAIEAVLSNKMGWLLASKTFGVPQATLRRHASNSNKTLESSAKGLGSWKATFPPDVERKLVEHLKLLESRLFGLTRASVQELAFNMAERNGFAHRFNPQKQKAGQEWLEGFLRRNKDISLRKPEATSAARAQAFNRPQVKKFFEIYGNLLESENIGPHRIYNADESGLSTVQKPQKILATAGRKQVGVITSAERGTNTTVVCCVNAVGTFVPPMMIFSRKNMKNELVDEAPPGTLGVAQPSGWMTTDLFLKWLKHLQNFVKSSIDDKVILIVDGHASHKGIETLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323449;
- 90% Identity
- iTF_00205061; iTF_00428943; iTF_00404756; iTF_00323449; iTF_00205064; iTF_00636342; iTF_00636343; iTF_00855830;
- 80% Identity
- -