Dpor005599.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- -
- Assembly
- GCA_905220455.1
- Location
- LR999990.1:3119279-3120352[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 2.1e-06 27.7 0.0 1 38 15 52 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCACGTAATTATAAGCGTACGACTGATCGTCAATCCTGGAGTGAGGAATCAATGCGTAAAGCCATAGAAGCAGTTCGCAGTAATAAAATGGGCTGGCTTTTGGCGTCGAAGACATTTGGAGTCCCACAAGCAACACTAAGAAGACATGCTTCGAATAGTAACAAAACTTTGGAGTCGTCTGCAAAGGGCCTAGGATGTTGGAAAGCTACTTTTACACCTGATGTGGAAAAAGAATTAGTTGATCATTTGAAATTACTTGAATCTCGTTTGTTTGGACTAGCGCGAACGTCTGTTCAAGAATTAGCTTTTGAGTTGGCTGAAAAAAACGGGTTTGCTCACAAATTTAACCCGCAAAAACGAAAAGCTGGACAAGAATGGTTAGAAGGGTTTTTGAGACGAAATAAAGATATTTCTTTACGAAAACCAGAAGCTACTTCAGCTGCTCGTGCTCAGGCTTTTAATCGACCTCAAGTCAAAAAGTTTTTTGAGATTTACGGACATCTGCTGGAATCTGAGAAAATTGGGCCACACAGAATTTATAATACTGACGAATCAAGCCTGTCTACTGTACAAAAACCCCAAAAGATATTGGCTTCTACTGGTAGGAAGCAAGTTGGCGTAATAACTAGCGCAGAACGTGGAACTAACACCACTGTTGTTTGTTGTGTTAATGCTATTGGTACCTATGTTCCGCCGATGATGATATTTTCTAGGAAAAATATGAAAATGGAATTGGTCGATAAAGCACCTCCTGGCACTTTCGGTGTAGCTCAACCATCAGGATGGATGACAACGGATTTATTTCTGAAATGGCTCAAACACTTTCAAAGTTTTGTTAAATCATCTATTGACGATAAAGTTATATTGATTGTCGACGGGCATGTAAGCCACAAAGGGCTTGAAACTTTAGAATATGCGAAACATAACGGCATTATTATTCTGTGTCTACCTCCACATTGCACTCATCATCTCCAGCCTTTGGATGTATCATTTTTCGCGCCTTTGAAGACATATTTCAACCAAGAGACATACAAATGGCTTAAACAACACCCAGGGCGTGTTGTTACATAA
- Protein Sequence
- MPRNYKRTTDRQSWSEESMRKAIEAVRSNKMGWLLASKTFGVPQATLRRHASNSNKTLESSAKGLGCWKATFTPDVEKELVDHLKLLESRLFGLARTSVQELAFELAEKNGFAHKFNPQKRKAGQEWLEGFLRRNKDISLRKPEATSAARAQAFNRPQVKKFFEIYGHLLESEKIGPHRIYNTDESSLSTVQKPQKILASTGRKQVGVITSAERGTNTTVVCCVNAIGTYVPPMMIFSRKNMKMELVDKAPPGTFGVAQPSGWMTTDLFLKWLKHFQSFVKSSIDDKVILIVDGHVSHKGLETLEYAKHNGIIILCLPPHCTHHLQPLDVSFFAPLKTYFNQETYKWLKQHPGRVVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636342;
- 90% Identity
- iTF_00373931;
- 80% Identity
- -