Cpyr000125.2
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- retn
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000005.1:785715-800636[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-20 5.8e-17 63.2 0.0 11 89 33 109 27 109 0.94 2 2 5.4 2.3e+04 -2.8 0.0 25 38 237 250 199 252 0.57
Sequence Information
- Coding Sequence
- ATGGCTGCCACATTGTTGCACCGGATAGGGCCGACCGGCCGCTGTTTTAATGTCTCTCAGACGGAATTACGCTGGATTGTTCTCAACTTTATTGCTCCCTTCATGATTGATCGTTGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTATTAGACCTGTATGAGCTGTACAACCTGGTGATAGCTCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGACTGCCGTCGTCCATCACGTCAGCTGCCTTTACGTTACGCACACAGTACATGAAATACTTGTATGACTATGAGTGCGAGAAGAAGAACCTATCCACCAGGAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAAGGTCGCCGGGCGTCTGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCACTGGGGGGTGTCGCGCCGCGCttgccgccgctgccgccgcacGCGCCGCATCTCGCGCAGCATGACATCGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCACCCAACAATGGCCCAGCACCAATAATGTCACCTCGTGACGCAGCCGCCCTTAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTctacaacaataacaacaacaacagtccACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTCTGTCGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCACCGCCCGCCAAGCGCCGCACGCCGCACCCCGCATCGCGGCCCTGCTCGCCGCGCACGTCCTCGCCGCGCTCTGACCTGCACGAGCCGCCACAGCACCGCCACACCCGCAGGGACGCCACGTCCCCGCCACAGATCAACGGCATGCCCAATTCCAACGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGAGGAGACGCAAGCACAGGTGACCAGCAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCCGGCAACGGTCAAAATGGACACAGACAAATGGTGTcctaa
- Protein Sequence
- MAATLLHRIGPTGRCFNVSQTELRWIVLNFIAPFMIDRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPNNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLSSGGKREACRSPAPPAKRRTPHPASRPCSPRTSSPRSDLHEPPQHRHTRRDATSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -