Cven015495.1
Basic Information
- Insect
- Coproporus ventriculus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027574865.2
- Location
- JAODAH020037063.1:1-3554[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-111 6.3e-107 357.7 31.9 1 300 1 285 1 285 0.97 2 2 0.0026 63 3.1 4.4 120 170 283 333 282 346 0.88
Sequence Information
- Coding Sequence
- gcGGAGGCTCGTTTGCTGGCCAGAAGGGCCGCCCGCGCTGAGGCACGGGAGATTCGCATGAGGGATTTAGAACGACAACAACGCGAACAGGAAGAAAACGCCGATCGACAATTTGATATGAATGCTGACCCTATAATACGAAGACCTACCAACAACACCAGCCGATATTTATCGAGTAGGAGATCATCGGAAGATTCTTTAGAGGATACTGGCAGTATTAGAGATTTGAGGCATGAGCTCAAAGAGGTTGAAGAGAAGTTTCGGAAGGCTATGATAGCTAATGCTCAGTTGGATAATGATAAAGCAGCCCAAACATATAAActagaagttttaaaagataggtTAGAAGAATTGGAGGAAGATCACTCCCAATTGAAACGAGAACATCGTGACAAGTGTAGGGAGTTTGAACAATTAAAGCGCTTAACAGTAAAACTAAAAGAAGATTTAGCTGTAGTAAAATCGGAATTAGAAGATAGGGACAGATTAATAGCAGAAAAAGGCTTAGTGATAGTAGGTGAAGAAGAAACGAGCGGTGAAAATGGTCCGCCACGAATAAAACGAGCATTAGTCAGCGCTGAAAATGCACAGTTTCTTGAAAATGCAGGAGAAGGTAGTTTAGATGTGCGACTGGCAAAATTCGCAAAAGAAAGGGGGGAATTACAAGATCAAATTAGTCACTTAAAATTAGAGTTAGAAGACGAAAGGAATAGAAGGCGGAAACATAGTGGCGGTATGTTAAATGGGCCTAATTATGATTCTGATCATGATGCTGCAGATGTACAAAgggAAGCAAATAAACAATCGTCAGAATACAAATTTAGAGCCCAAAAAGCAGAGCAAGATGTTGCAACATTACAAGCAACTGTCGCCAGGTTAGAAAGTCAAGTAATTAGGTATAAATCAGCCGCAGAAATTTCGGAAAAAGCAGAAGAAGCTTTAAAAGCTGAAAGGAGGAAACTTCAAAGGGAGgcTCGAGAAGCACAGAATAGAGCAGAAGAACTAGAAGTTTCAAATACACATCTAATCAAAAGgctagataaattaaaaaatgcaaaatcagCTTTACTTAAAGATCTTTGA
- Protein Sequence
- AEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMNADPIIRRPTNNTSRYLSSRRSSEDSLEDTGSIRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYKLEVLKDRLEELEEDHSQLKREHRDKCREFEQLKRLTVKLKEDLAVVKSELEDRDRLIAEKGLVIVGEEETSGENGPPRIKRALVSAENAQFLENAGEGSLDVRLAKFAKERGELQDQISHLKLELEDERNRRRKHSGGMLNGPNYDSDHDAADVQREANKQSSEYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEISEKAEEALKAERRKLQREAREAQNRAEELEVSNTHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- -
- 80% Identity
- -