Basic Information

Insect: Conomelus anceps
Gene Symbol: -
Assembly: GCA_948455865.1
Location: OX418222.1:62229405-62232035[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.9e-06 0.098 15.2 0.2 22 47 328 353 320 359 0.84

2 9 0.027 6.7e+02 2.9 0.5 23 52 357 386 352 389 0.88

3 9 0.00036 9.1 8.9 0.1 21 44 439 462 427 470 0.92

4 9 0.71 1.8e+04 -1.6 0.0 23 52 469 498 465 499 0.77

5 9 0.012 2.9e+02 4.1 0.0 23 44 497 518 492 524 0.88

6 9 0.066 1.7e+03 1.7 0.0 26 48 544 566 533 569 0.83

7 9 0.28 7.1e+03 -0.4 0.0 24 47 646 669 641 675 0.78

8 9 0.00064 16 8.1 0.1 23 52 673 702 668 703 0.86

9 9 0.045 1.1e+03 2.2 0.1 23 44 701 722 697 730 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.9e-06	0.098	15.2	0.2	22	47	328	353	320	359	0.84
2	9	0.027	6.7e+02	2.9	0.5	23	52	357	386	352	389	0.88
3	9	0.00036	9.1	8.9	0.1	21	44	439	462	427	470	0.92
4	9	0.71	1.8e+04	-1.6	0.0	23	52	469	498	465	499	0.77
5	9	0.012	2.9e+02	4.1	0.0	23	44	497	518	492	524	0.88
6	9	0.066	1.7e+03	1.7	0.0	26	48	544	566	533	569	0.83
7	9	0.28	7.1e+03	-0.4	0.0	24	47	646	669	641	675	0.78
8	9	0.00064	16	8.1	0.1	23	52	673	702	668	703	0.86
9	9	0.045	1.1e+03	2.2	0.1	23	44	701	722	697	730	0.82

Sequence Information

Coding Sequence: ATGATAAGGCTCTTAGCAGACAAGCAAAGCAAGTGCTCTAAACATATCACTAATACTGCTCTTCGAGGTGTCTCATTCGAAACTCTTGGTCAGATGATGGTGCATCAGGGGTGTTCTCAATTAGGTATTCAGCCACCTCCCGGCTATGATCTGCGTCATCATCAAGGAGTTGTGTCAGGAGAGTATCCGGAGCCTGTTTGTGAAATAGGGGCATTCAGCAATGGTGCTAGTGCCCCACAAGGTGCTACAGGAAACCCGGCTGACAAAGAAACAATGCATCAAAATATAATTGTCTATGCAAATGATGAACCAAGCATGCATGAGGTACCATGCAATCTTTGCAATGTTACATTCAGTAATACCTTTGCTTTGTTGAACCATACACGTATAGCTCATAGAGTCTTAAAATGTGATGACACTTATCAGAATATGATAAGTGTAAGAGCTTCCAGTATTTGTCGCGAGTTTAATGAAGCAAAGACAGGTTCTGTTACTTCAGCAAATACCAGAGATGTGCCATCAACAGTTGATGAAAGTGCAGTAAAGGCTATGACAAGTCCTcaaatgattgctcatggagttctccatcagctcaaccatcatcaaaatccaaacaatttgcatcagcaacaacaacaacaacagcagcagcaacaacaacagcagcagcaacaacaaaacccacaaaacccatCACGGAATAATGTCCACCAAAACCAGTCACAGACATCTCAAGCTGTTGAAATTTCCACCACTGTTGCTTCAATTGTGTCATCTCTTGCTCAGGCCTCTGGAACTGCAATAACGACAACTAATCAGCCAGCAAATTCAACAAACAAATATGGAGTTAGAATGTGTGATAAAAGCCAGAATACTGTTTCTGCTGCTGGTGTAATAGCATGCAGTCATGTGTGTACGGTTTGCAATAAAGCATTCAACAAACCTTCTGATTTAGTCCGTCATAGTATTGTGCACACTGAAGATCGACCTTACACTTGTGATGTTTGCAACTCAAGTTTTCGTAATTCTAGCAATCTTCGAATGCATCTTCTAACACACTCTGATACAAAGCCTCATCCATGCACAGTTTGTGAAAAATCATTTCGCCGACTCTCAGACTTGGAGCGTCATACTTGTTTACATACAGGAGCACGTCCATTTGGATGCACAATATGTGGAATGGCATTCACCACCAACTACAATCTGAAGATACACTCAATGAAGCATACTGGCTCTTTACCTTACCCATGTACTCAGTGTGAGAAGTCATTCAGTAAGCCTTCAGAACTGCAACGACATCTAGTGATACACACTGGAGAAAGGCCATTTTCATGTCCCCAGTGTGGTATGGCCTTTTCAAATTCAAGTAATTTGAGAAATCATATGATCACTCATACAGGTCGGAGACCATACCCATGCTCTATGTGTGACAAGGCATTCACTCGCCCTTCTGACGTCAAACGACATGTCTTGATACACACTGGAGCTCGACCTTTTGCATGCCAAATTTGTGGACTAGCTTTTGCTGACTCGTCAAACCTTAAGAAGCATACATTAACACATACAAAAAATAATAAGGGCTTTAACGCAGGTGTATCATCAACAAATAATGTGCCAGCTGTAGGCGTTCAATGTAATATTTGTAGCATTGTGTTGCAGAATCTAAATGAACTGAACAACCATTTAATAGCAGCACATAGCAATACAGGATCAGGTGGATTAGATATGGTGTCCAACAACCGTGGTAATGGTAATCCTAGTGGTGCCAATACTAACATATCAAAAGACAATACAGATGGTAGTGCTTACCTCCCATCACAGGTAGTTGTCAAAACTCTTATGAAACCAATGCAGTATGAGTGTGCCGTGTGTGGAGTGCGTTTTGTGCATGCAATTCACCTACAGGAACATTCTCTGACTCACGATCGTGAACACTCATTCCAATGTGAAATCTGCGACAAAAGTTTTGCCCAAGAGACATTTCTACAGCAGCACCTTTTGACGCATACTGAAGCGCGGCCTTTTGAATGTCCAGAATGCTACAAATGTTTCAAGAGCTCTTCGCACCTCAAAAACCATGTGGCCATACACTCAGGTGTTAAACCGTTCACTTGTGAAACTTGCAGTAAGGCGTTTTTAAAGCAGGCTTCATTGAGGCGTCATCAAGCCACACATGCTCGAGGCAACCCTATTCCGTGTGCCGTTTGTGGAAAGAGTTTTCTGAACATGGAATATCTTAGAAAGCATACTGTTACTCATACAAATGTGGTCGTGACTCACTGA
Protein Sequence: MIRLLADKQSKCSKHITNTALRGVSFETLGQMMVHQGCSQLGIQPPPGYDLRHHQGVVSGEYPEPVCEIGAFSNGASAPQGATGNPADKETMHQNIIVYANDEPSMHEVPCNLCNVTFSNTFALLNHTRIAHRVLKCDDTYQNMISVRASSICREFNEAKTGSVTSANTRDVPSTVDESAVKAMTSPQMIAHGVLHQLNHHQNPNNLHQQQQQQQQQQQQQQQQQQNPQNPSRNNVHQNQSQTSQAVEISTTVASIVSSLAQASGTAITTTNQPANSTNKYGVRMCDKSQNTVSAAGVIACSHVCTVCNKAFNKPSDLVRHSIVHTEDRPYTCDVCNSSFRNSSNLRMHLLTHSDTKPHPCTVCEKSFRRLSDLERHTCLHTGARPFGCTICGMAFTTNYNLKIHSMKHTGSLPYPCTQCEKSFSKPSELQRHLVIHTGERPFSCPQCGMAFSNSSNLRNHMITHTGRRPYPCSMCDKAFTRPSDVKRHVLIHTGARPFACQICGLAFADSSNLKKHTLTHTKNNKGFNAGVSSTNNVPAVGVQCNICSIVLQNLNELNNHLIAAHSNTGSGGLDMVSNNRGNGNPSGANTNISKDNTDGSAYLPSQVVVKTLMKPMQYECAVCGVRFVHAIHLQEHSLTHDREHSFQCEICDKSFAQETFLQQHLLTHTEARPFECPECYKCFKSSSHLKNHVAIHSGVKPFTCETCSKAFLKQASLRRHQATHARGNPIPCAVCGKSFLNMEYLRKHTVTHTNVVVTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01354290;
90% Identity: iTF_00365979;
80% Identity: iTF_00365979;