Basic Information

Insect: Conistra vaccinii
Gene Symbol: -
Assembly: GCA_948150665.1
Location: OX411322.1:8678627-8687265[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.2 2.5e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.087 7 7.9 4.1 1 23 84 107 84 107 0.97

3 20 5.1 4.1e+02 2.3 4.0 1 23 194 216 194 216 0.96

4 20 0.0017 0.14 13.2 1.0 2 23 222 243 221 243 0.97

5 20 2.1 1.7e+02 3.5 1.4 1 23 249 271 249 272 0.94

6 20 0.21 17 6.7 3.4 2 22 508 528 507 528 0.95

7 20 0.087 7 7.9 2.6 1 23 625 647 625 647 0.95

8 20 3.2 2.5e+02 3.0 0.3 2 23 784 805 783 805 0.95

9 20 0.0011 0.092 13.8 0.5 2 23 885 906 884 906 0.96

10 20 0.13 11 7.3 0.3 1 23 914 936 914 936 0.97

11 20 5.1 4e+02 2.3 2.6 1 23 972 994 972 994 0.93

12 20 0.00024 0.019 15.9 4.0 1 23 1002 1024 1002 1024 0.99

13 20 0.11 8.5 7.6 1.9 1 23 1103 1125 1103 1125 0.99

14 20 7 5.6e+02 1.9 0.2 2 19 1210 1227 1209 1231 0.92

15 20 0.0022 0.18 12.9 1.0 1 23 1296 1318 1296 1318 0.96

16 20 0.0094 0.75 10.9 0.5 1 23 1324 1346 1324 1346 0.96

17 20 0.0068 0.54 11.4 2.6 1 23 1436 1458 1436 1458 0.97

18 20 0.00017 0.014 16.4 1.4 1 23 1464 1486 1464 1486 0.99

19 20 0.84 68 4.8 2.7 1 23 1578 1600 1578 1600 0.96

20 20 0.0095 0.76 10.9 5.8 1 23 1611 1633 1611 1633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.2	2.5e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.087	7	7.9	4.1	1	23	84	107	84	107	0.97
3	20	5.1	4.1e+02	2.3	4.0	1	23	194	216	194	216	0.96
4	20	0.0017	0.14	13.2	1.0	2	23	222	243	221	243	0.97
5	20	2.1	1.7e+02	3.5	1.4	1	23	249	271	249	272	0.94
6	20	0.21	17	6.7	3.4	2	22	508	528	507	528	0.95
7	20	0.087	7	7.9	2.6	1	23	625	647	625	647	0.95
8	20	3.2	2.5e+02	3.0	0.3	2	23	784	805	783	805	0.95
9	20	0.0011	0.092	13.8	0.5	2	23	885	906	884	906	0.96
10	20	0.13	11	7.3	0.3	1	23	914	936	914	936	0.97
11	20	5.1	4e+02	2.3	2.6	1	23	972	994	972	994	0.93
12	20	0.00024	0.019	15.9	4.0	1	23	1002	1024	1002	1024	0.99
13	20	0.11	8.5	7.6	1.9	1	23	1103	1125	1103	1125	0.99
14	20	7	5.6e+02	1.9	0.2	2	19	1210	1227	1209	1231	0.92
15	20	0.0022	0.18	12.9	1.0	1	23	1296	1318	1296	1318	0.96
16	20	0.0094	0.75	10.9	0.5	1	23	1324	1346	1324	1346	0.96
17	20	0.0068	0.54	11.4	2.6	1	23	1436	1458	1436	1458	0.97
18	20	0.00017	0.014	16.4	1.4	1	23	1464	1486	1464	1486	0.99
19	20	0.84	68	4.8	2.7	1	23	1578	1600	1578	1600	0.96
20	20	0.0095	0.76	10.9	5.8	1	23	1611	1633	1611	1633	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCGGACGCCGCCGAAGATTTTGAATTACCACAGTGCAAGATAAGGAGGAATTACAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTTAGACTCAAGATTTACGATTGTCCACACTGTGTTTACGCCTCGAGACATCATCAAAAACTTATAAGACACGTCAAAATGGTTCACGGAGGATCAAAGCCGACTTCTGCAGCTGCTAAACTGCAGGATGCAGAGCTATCACCTCCCTCCAACGATATCATGGAGCCAGCAGAGCGCATTGAAGACATGCTTGAGGAAGTCGAGGACTGCGAGGATATGATGATGGAAGTAGACGATGACTCCATGGACCAACCTGATGATATCGATGGCGACTGCGATAGAAGTGTTGACTACGCATCGCCCTCTTATCGGAGGGCACATCTGTCAAAAGCTAAGGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACGCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGCGATTTTCGAACTCCATACAAGTGGAATTTGGACCGTCACATGAAGAACCACGGTGGAAGTGGGAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACATGAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCACGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACATTCGGTCTCGGACATGGGTCTCCAATACGCAGAGCGAGAACTAGTCAGTTGCAAAAGTGATTCCAATGACGGTACAGCGTCTGACGCAATCACCAGAAAAGAGTCTTCGCAAGATGGATACAACCAGCTTTCACCAACCCACAGCGCAGACGAGAAGCAACATAAACAAAGCAGAAAGATTCCCCGACCAATACCACAACTCATACCGTTAAACTCTTCGACGCCCAACCAAAAACAAACGTGCTCTGGGGAACCGCCACAGAAGAAGTTCAAGGAATCTTTACCCATTGACATTGAAGATATATCTGCAGAAAATACTCTTCTACCAGCAAATCCATCAATAAAAGAGACTGCAGGTCGAAAGAAAAACGAATCATTTTTCGACAGATTAAAAGAAAGACTGCTTACAGAAACAGGAGAAGAAGGCTCACTAATATGCAAGATCTGTGGATTTGAAAGTAAATGCCTATCGGAACATTCTGTTCACGAGAAAAATTGCTCTCCACAAACGAACCGCGTCAATGCAAACACATCGCTTAAAAGTTTAAGTTCGACTCGATGTCAGAATTGCAGGCACAGATGTAAATCTAGCGCTGACTTGTACATCCACATGCAAACTTGCGGCAAGAGCGAAAACATCGACGATGAAAACACTTTAAAAAATGAAAACAGTTGTGATGAAGTCATTCCAATCCATGACAAAGAGACTGAACCGCACCCAATGGAAAACGTCGTTTTCGTATGGAACAACATTAATCATGACCCTAACAAGTTTGATGTACCACTAGACATTAATATAAATGATGATTCCACTCTACCAGAAATACATCGAAGCTTTGACGCAGAGATTGTTGATGAAAACGAAAGCATGAATTTGTCGCCAAGTCAAGCTATTGGAAGGAAGGTCTTCAAATGTCCACATTGCCCATTTTTCTCCACAACAGCGTCCAGATTTCACGTTCATATCGTGGGACACTTAAACAAAAAACCATTTGAGTGTTCCCTCTGCAAATATAAATCTAATTGGAGATGGGATATAACCAAACACATTAAATTGAAATCTGCGAGGGATCCTGAACATAACGAAGCAAAAGTACTTATGACTGACGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTAGCGATGCCTGTTTTAAATGAAAATGGCGAAAATGAGTTTCATTACCTGGATCCTAATACCGCAGTCGATAGCACGATGGAAATGGATGAATCATTTAATGATATATCAGACGTGATGAATGTACAATTTGAGATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAATTACAACTATATTGATAACAGAGGTCTCAATGATATGAAGAAGCCTAAAAAAACATTATGGAAATGTAAAAGATGTAATTACAAAGATCCCTCAAGAGAAGCTCTTTTAGAGCATGTACGTGAACATTCCAGATCAGATGGCATCAATGATGAACTAAACAAACCGTCTATTAAGAAACCTGAAAATAATACTCCCGACCCAGCAGACCTGGCGTATCGTTGTGGCCATTGTAATCAGTTGTCTAATTGGAAACATGTCATACAGCGCCATTGCCGATTAAAACACGATGGAGTAATCAAAGTGATAACTACAGTTAAACCAAAACCTGACCCACCAATGAACATCAATGAGATCAACATTGACACTTGCAACAAATGCCCGTACAGAACGAGTGACAAGAAACTACTCATTGCTCATTTACAACAGCATCAGCCCTCGCCGAATTCGATTTTCAAGTGCTACTTCTGCCCATTCTTCGTAAAGGATGAGCCAGAATTAATCCAACATCTACTCCTGCACGGTATCACTGACCCCGAAGATTACATCGCAAAAGCAATGGGAACTAAATCCCCAGGACCAGAACCGCAAGCACCTGTTACTACGACATTAAACTCTACCAAGCGTCACAAATGCATAGAATGTCCATACGAAACAAACAGTAAGTCACAATTCATGTACCACGAACAATTTCATCGACTTCCGGCTGATACACCTTATAAATGTCCAGAATGCAACTACAGTGTATCTAAGAGACACCTGCTGCACCAGCATCTGCGAGTACACGGAATCAAAAGAATTGAAACTGAAGCCGAATTAGAAGCAGCACAAAACAAGGTAGCTAAAATGGACTTCCATATTAATCTTGATGAAATACCATATGTCTGGGTTTCTGCCAAGAATGAGTTTCACAAAATGTACAAGTGCCGATATTGTTCATACGTTAATGCTGTAAAAAGCAAAATACCAAATCATGAAAAAATTCATTGCATCGTATTCGAAAACAATGATACAACTATCTACAAGTGTTTGGAATGTAAATTCACATGTGATAACGCCGGCAGGCTAGCCGAGCATTCCAAAACTCACGGGGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGATACACCCGATGATGAACAAATCACTAAATTGAGAAAGGTTATAGAAATTGAAAAGTCAGCAAATCCAGAAAGTTTCTCTAGAGATGAAGGCACTACGCACGAATTAAGAGAAATAAAATTATTATATTTTTGTCAAAAGTGCCCAGCAAGATTCCTTGAAGACTGTGAACTAGACGCTCATGAAAAATGTCATGATCTAACATTGCCCAATAAATGTAAAAGTTGTGACTTTTCAGTCACCGAAGAAAATGAATTAGCGGCACATGATACTGTGCACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTGTTCACCACTCACATCCTTTGCACAAACAACCCATGCTAGATTTTGTTCTCTGTCAAAATACTTCAGAGATTACTTGGCGAGCCACTGGGCCAAGTAAACCTGAACATATCGAAAGTCCTATGAAAAAAGATACAAAACACGTGCCAAAACAATATTATTGCAAACAATGTCCAGCTAAGTTCTTCAAAAGTTCCGCACTTACCTATCACATGGGGCTACATGGAGGTGAGGGCGAGTTTAAGTGCAAGAAGTGTAATTACGCCGTGAAGAACGTTGGAAATCTGGGCAAACATGAATTACTTCACGAAAATGAGAACAAACCTACAACCTGTGACTATGAATCTGGTGAAGATATGGATTATAAAAATGTTCCTTTGTCGGGCACAGATTTGTTCCAGAGAAAGACTGAGGCTCAGAAAAGAGTATTAACTGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCTGTCCTACAAGCCGATCCCCAATTCGGTTATTTAATGCATGGTAATCCTGAATTTATATATCCCACGTACCTGAAAAATGGACGTCAAAAAGAAAAACGATACAAATGCCACAAGTGCCCCTCAGCTTTTGAGAAAAGAGAACAATATAAAATTCATTTGTCATTGCACGGCTCCAAGCAGAGATATAAATGTGAGTTATGTGATTATTCAGTAAAATATTACGCTAATTACGTTCAACATATGCGAAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGAAAGAAAGACAATAATGATTTCACAGAATCTGAACATCAAGAAGACGTTAAGCAAGACGACAGCAGTGATAACATTAAACTTGCGATAAAAACTATGCCAAAAGGAGCTGCTAAGAGCGACTTTCAACAATTCTCAATTAGCGACCAGCAAACACTCCGACTGCTGCAGAGGAGACGGTCAATGAATAATTCAGGAAAGGACCACAGCACTTCTGAAACTTCGCCGATTAAAGAGCGCAAAATGCACATGTGTCTGTTATGTCCTTACACTAACCAACGTCAAGATTCTTTGAGCAATCATTACAGAAGGCACGGTGACACCGATGTCCTGAACGGAGGAAGTCATAAATGTACCCATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAGCATCTGAAGACACACTTCAACTACCACAAAACTCTTATTCCCGAATGTTTTGTGGCTAACGAAGCTGTTAGTTTTACCATAACCAAATTGGATGAAGATAGTGAATCAGTTGATCTCAAATTAGACATGCAGAACAAGAGTTTTGCATGTAATGACGAAAAGATATTTGTGAAAATTAAAACTGGAGAGTTATTGGTGGAATAA
Protein Sequence: MLQQMSSPPSAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKPTSAAAKLQDAELSPPSNDIMEPAERIEDMLEEVEDCEDMMMEVDDDSMDQPDDIDGDCDRSVDYASPSYRRAHLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDMSDTVIAEFDAASTLLPKEEEGSGDSRSSHSVSDMGLQYAERELVSCKSDSNDGTASDAITRKESSQDGYNQLSPTHSADEKQHKQSRKIPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESLPIDIEDISAENTLLPANPSIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRVNANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSENIDDENTLKNENSCDEVIPIHDKETEPHPMENVVFVWNNINHDPNKFDVPLDININDDSTLPEIHRSFDAEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDSTMEMDESFNDISDVMNVQFEMQPLNLQTQHSEDNYNYIDNRGLNDMKKPKKTLWKCKRCNYKDPSREALLEHVREHSRSDGINDELNKPSIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPGPEPQAPVTTTLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIKRIETEAELEAAQNKVAKMDFHINLDEIPYVWVSAKNEFHKMYKCRYCSYVNAVKSKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEYDTPDDEQITKLRKVIEIEKSANPESFSRDEGTTHELREIKLLYFCQKCPARFLEDCELDAHEKCHDLTLPNKCKSCDFSVTEENELAAHDTVHTDEYHTKTKMLKFVHHSHPLHKQPMLDFVLCQNTSEITWRATGPSKPEHIESPMKKDTKHVPKQYYCKQCPAKFFKSSALTYHMGLHGGEGEFKCKKCNYAVKNVGNLGKHELLHENENKPTTCDYESGEDMDYKNVPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNNDFTESEHQEDVKQDDSSDNIKLAIKTMPKGAAKSDFQQFSISDQQTLRLLQRRRSMNNSGKDHSTSETSPIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDTDVLNGGSHKCTHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEAVSFTITKLDEDSESVDLKLDMQNKSFACNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -