Ccro022059.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- -
- Assembly
- GCA_905220415.1
- Location
- HG991981.1:6886163-6886471[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-13 2.3e-10 40.4 0.0 2 39 11 48 10 53 0.93
Sequence Information
- Coding Sequence
- ATGGAGAAGAGAAAGTATAATACTTGGAAGCAAGAAGATATGGATGAAGCTTTACAGAAACATCGGAGTGGAGAAATAGGATTTAATGAGGCCTGCAGAAGATTTAATATACCGAAACCTACACTGAGACGACATTTAAAAAATTTGAATACAAGAACAAAGTTTGGAAGACCTAACGATATCCCACCAGATATGGAAGAGATACTGGCACAGCATTTAATGAATTTAGAGTCTTGTTTCTTCGGATTAACTACCACTGAATTCAGAAAGCTTGCATTTGAGCTACCTATATGTACAAATTTAAACTGA
- Protein Sequence
- MEKRKYNTWKQEDMDEALQKHRSGEIGFNEACRRFNIPKPTLRRHLKNLNTRTKFGRPNDIPPDMEEILAQHLMNLESCFFGLTTTEFRKLAFELPICTNLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461485; iTF_01034462; iTF_00791124; iTF_00321529; iTF_00321528;
- 90% Identity
- iTF_01028192; iTF_00791124;
- 80% Identity
- -