Nsyl018551.1
Basic Information
- Insect
- Napeogenes sylphis
- Gene Symbol
- -
- Assembly
- GCA_959347405.1
- Location
- OY365781.1:13256288-13256620[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-13 7.1e-11 43.0 0.0 2 43 11 52 10 54 0.92 2 2 5.8 3.2e+03 -0.7 0.0 22 31 95 104 94 104 0.84
Sequence Information
- Coding Sequence
- ATGGCGAAGGGACAGTATAATACTTGGAAGCAAGAGGATATAAATGAAGCTTTGGAAAAACATCGTAATGGAAAAATTGGGTTTAATGAAGCTTGTAGAAGATTTAATATACCAAAGCCTACCCTGCGACGTCATTTGAAaggattaaataaaacaaaaaaattcgGACGACCTAATGATATGACTCCAGAAATGGAAGAAGTATTAAAACAGCATTTGATTAACTTGGACTCGTGTTTCTTTGGACTAACCACTACTGAGTTCAGGAAACTTGCCTTCGAGCTTGCTGAAAAATTCCAAATACCTCATCGTtttaataaagacaaaaaatag
- Protein Sequence
- MAKGQYNTWKQEDINEALEKHRNGKIGFNEACRRFNIPKPTLRRHLKGLNKTKKFGRPNDMTPEMEEVLKQHLINLDSCFFGLTTTEFRKLAFELAEKFQIPHRFNKDKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358458;
- 90% Identity
- -
- 80% Identity
- -