Mlor021147.1
Basic Information
- Insect
- Mythimna loreyi
- Gene Symbol
- -
- Assembly
- GCA_029852875.1
- Location
- CM056798.1:16266228-16266593[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-13 4.2e-10 40.0 0.0 2 38 11 47 10 52 0.94 2 2 7.5 4e+03 -1.5 0.0 22 30 95 103 94 104 0.84
Sequence Information
- Coding Sequence
- ATGGAGAAGAGAAAGTATAATACTTGGAAGCAAGAAGATATGGATGAAGCTTTACAGAAACATCAGAGTGGAGAAATAGGATTTAATGAAGCCTGCAGAAGATTTAATATACCGAAACCTACACTGagacgacatttaaaaaatttgaatgcAAGAACAAAGTTTGGAAGACCTAACGATATGCCACCAGATATGGAAGAGATACTGGCACAGCATTTGATGAATTTAGAGTCTTGTTTCTTCGGATTAACTACCACTGAATTCAGAAAGCTTGCATTTGAGCTCGCTGAAAAATTTCAAGTGCCTCATCGTTTtaacaaagagaaaaaaatagcgGGCAAAAAGTGGTATTATAGGTTTATTTAA
- Protein Sequence
- MEKRKYNTWKQEDMDEALQKHQSGEIGFNEACRRFNIPKPTLRRHLKNLNARTKFGRPNDMPPDMEEILAQHLMNLESCFFGLTTTEFRKLAFELAEKFQVPHRFNKEKKIAGKKWYYRFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01127241;
- 90% Identity
- iTF_00358458;
- 80% Identity
- -