Cdea032318.1
Basic Information
- Insect
- Coleophora deauratella
- Gene Symbol
- Lztr1
- Assembly
- GCA_958295455.1
- Location
- OY282409.1:9205555-9217355[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-18 3.6e-15 57.3 0.0 5 109 255 389 251 390 0.86 2 4 9.3 4.4e+03 -0.9 0.0 77 107 389 419 387 421 0.83 3 4 2.8e-16 1.3e-13 52.3 0.0 9 97 485 573 480 587 0.86 4 4 1.4 6.7e+02 1.7 0.0 75 105 585 615 576 619 0.81
Sequence Information
- Coding Sequence
- ATGTTCGTATTTGGCGGTTACACAGGCGACATCTTGGCCAACTCGAACCTCACCAATAAGAATGACCTGTTTGAATACAAGTTCCATAATGCACAATGGGTGCAGTGGAAGTTCACAGGACAGCAACCGGAGCCACGATCAGCACACGGTGCAGCGGTGTACGATGACAAGCTGTGGATATTTGCCGGCTATGATGGGAATGCCCGACTTAATGACATGTGGACCGTCAACCTAAGTGGCGAGAACCCCCAGTGGGAGCGCGTGGAACAGAAAGGCCAATGCCCTCCCACCTGCTGCAACTTCCCCGTGGCGGTGGCGCGCGGCCAGATGTTTGTGTTCAGCGGACAGAGCGGCGCCAAGATCACCAACGCGCTGTTTCAGTTCGACTTTGAGTCGCGCACATGGAGCCGTGTGTGCACAGAGCACCTGCTCCGGTGCGCGGgcccggcgccggcgcggcgctaCGGCCACGTGATGGTGGCTCACGGGAGGCACCTGTATGTCTTCGGCGGCGCCGCCGATAACACCCTGCCCTCTGACCTGCACTGCTACGACCTAGATACTCAGATGTGGTCGGTGATAAACCCGGCGCCCGAGTCGCAGATCCCGTCGGGGCGGCTGTTCCACGCGGGCGCGGTCGTGGGCGACGCGATGTACGTGTTCGGCGGGACAGTCGACAACAACGTGCGCAGCGGGGAACTATTCCGCTTTCAGCTTTCGAACTTCCCGCGTTGCACCCTGACTGACGACTTCGGGGGCATCCTCAAGTCCCAGCAGTTCTGTGACGTCACGCTCATGGTGGGCACCGACCAGACGCCGGTGATGGCCCACCAGGCCATGTTGGCTGCCCGCTCGCAGTATCTACGGGCTAAGATCATGGAGGCGCGGCAAGAGTTAAACAAACTCATAGAACAGGGCGAAATAAAGGAGGAAGTGGTTTCCTACATATCGCGACCGCAGCTCACGCTCCATTTGCCAGAGGCCACGCCCGAAGCCTTTCAGATGGTGCTGAACTACATATATACGGACAGGATCGATCCCACGGAGAAAGACGAAGACCCAGCCTCCCCCGCCACCATCCTCCTCGTCATGGAGGTGCTCCGTCTGGCTCTGCGTCTGAGCATACCCCGGTTACGCGGCCTCTGCGCCCGCTTCCTGAAAGCCAACCTATGCGCGAGCAACGTGCTACAAGCGTTGCACGCGGCGCATCACGCTAGCTTGCAGTGCATCAAGGAGTATTGTTTGCGTTACGTGGTGAAAGACTACAACTTCACGCCGATAGTGATGTCCCCGGAATTCGAGGGCATGGAGCAGTCGCTCATGGTGGAGGTGATCCGGCGCCGCCAGCAGCCGCCGCCGGCCAAGCCGCCCGCCAGCCACGAGGCCGACCACGAGATCGTCGGTACAACCCTGGAACAAGACATGAGCGTTTTCgtgagcggcggcggcgcggaaCTGAGCGACGTTAAGTTTCGCGTCGGGAACGCTTACCGGCCCGGTCACAGGTCCATATTGGCGGCCAGGGCGGCATACTTCGAGGCTATGTTTAGGTCTTTCTCGCCTGAGGACAACATCGTTAATATTCAAATCTGCGATACAGTCCCTTCAGAAGAGGCGTTCGACTCTCTCCTCCGCTATATCTACTACGGCGACACGAATATGCCCACCGATGATGCTCTTTACTTATTCCAAGCACCCATTTATTATGGCTTCACAAACAACCGCCTCCAAGTGTTCTGCAAACACAACCTCCAGACTAATGTGTCGCCCGACAATGTACTGGCGATCCTGCAAGCCGCCGACCGCATGAGGACTGTCGATATCAAAGAGTACGCTCTCAAGATGATCGTGCACCACTTTGGAGTCGTAGCGAAACAAGAAGCGATCCGCTACCTCCCCCAGCCTCTCCTGGTGGACATAATCTGGGCGCTGGCCGAGGAGCGGCAGTTCGACGCGCCGCTGCCGCTGGCGCCGCGCCCGCtgtccgcctccgcctccgccgaCACGCTGCACGATGACGACAGGCACCGCCAGAACAAATAG
- Protein Sequence
- MFVFGGYTGDILANSNLTNKNDLFEYKFHNAQWVQWKFTGQQPEPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTVNLSGENPQWERVEQKGQCPPTCCNFPVAVARGQMFVFSGQSGAKITNALFQFDFESRTWSRVCTEHLLRCAGPAPARRYGHVMVAHGRHLYVFGGAADNTLPSDLHCYDLDTQMWSVINPAPESQIPSGRLFHAGAVVGDAMYVFGGTVDNNVRSGELFRFQLSNFPRCTLTDDFGGILKSQQFCDVTLMVGTDQTPVMAHQAMLAARSQYLRAKIMEARQELNKLIEQGEIKEEVVSYISRPQLTLHLPEATPEAFQMVLNYIYTDRIDPTEKDEDPASPATILLVMEVLRLALRLSIPRLRGLCARFLKANLCASNVLQALHAAHHASLQCIKEYCLRYVVKDYNFTPIVMSPEFEGMEQSLMVEVIRRRQQPPPAKPPASHEADHEIVGTTLEQDMSVFVSGGGAELSDVKFRVGNAYRPGHRSILAARAAYFEAMFRSFSPEDNIVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTDDALYLFQAPIYYGFTNNRLQVFCKHNLQTNVSPDNVLAILQAADRMRTVDIKEYALKMIVHHFGVVAKQEAIRYLPQPLLVDIIWALAEERQFDAPLPLAPRPLSASASADTLHDDDRHRQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752177;
- 90% Identity
- -
- 80% Identity
- -