Chom000094.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cochliomyia hominivorax
Gene Symbol
Runx1
Assembly
GCA_004302925.1
Location
PYHX01002589.1:247865-271051[+]

Transcription Factor Domain

TF Family
Runt
Domain
Runt domain
PFAM
PF00853
TF Group
Beta-Scaffold Factors
Description
The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-73 1.8e-69 231.2 0.0 3 129 13 139 11 139 0.98

Sequence Information

Coding Sequence
ATGACTTCAGACATTTTAGCTGAACGCACTTTAGGCGATTTTCTCACTGAACATCCGGGCGAACTAATACGCACCAGCAGTCCATTGTTTGTTTGCACGGTGTTACCGCCACATTGGCGTTCGAATAAAACGTTACCGGTGGCATTTAAAGTTGTTTCATTGGGCGATATTATGGATGGTACAATGGTGACGGTAAGAGCGGGTAATGATGAGAATTATTGTGCTGAATTAAGAAATTCAACGGCGGTTATGAAAAATCAAGTGGCGAAATTTAATGATTTACGTTTTGTGGGACGAAGTGGTAGAGGGAAAAGCTTTACATTGACAATCACAGTTTCAACCAATCCGCCCCACATTGCCACCTATAATAAAGCTATTAAAGTCACCGTTGACGGACCCCGGGAACCACGTTCAAAAACTAgacaacagcaacaatttcATTTCGCTTTCGGCCAAAGACCTTTTCATTTTTCAACGGATCCATTATCCGGTTTTCGTATGCCACCAATTGGTAACTGTCAAAGCGCTAGTAATACACATTGGGGTTATGGTTCAGCAACAGCTTATTCGCCATATTTGGCCAGTAGTGGATTATCTTCATGTACAACACCAACATCGGCCCAGTTTAATAATCCAGCTTTGGGTTTTTCTTGTTCGTCAAATGAACAGCCAAATAATCAAGATTTTACAGGAGCTTCCAATAGAGATTGTGTACCAAtgctACCCGATTCTACAGCCTCAGATTTGGATCAACATCTAAGCAACTTAGTAGGTTCAACAACGGGACAAATGTCTCATCACAGTTTACTGGGCTCTACCGGACAAACGGCTATTTCCTCTACGGTTAATGGTGGTGCTGTGCCGGGTTCGAATTCAATTTTAGTGCCGCGTTATCATAATTCTAACAACGATTATAATGTACATTCTAGTCAAAATGGCCCACGCAGTTTAAGTGATTCATCCCAAGCTGAATCGCCCGTGCAAGAAGATTTGCTATCTACAAATACTCCCAATTTAGGTGGAACAAATGGTAATACTGCTAATAATGGTGGAGCAAATAGTAACTCAAATGGTTCTGCCAATAATTCGCTAGTGGGAACGAATCAAAATTTCAGTGGTATTGTTAATCAAACACAAAATCCAGCAGCTTATGGCACAACTGGTACGGGAGTGGGTGTGGGAGGAGGCCATTCGGGAGCCGCAGGAGCTGGTTGTAATGGTTCTTTATATCCAGTTTTGCCGGCCAGTTTATTATACTCTCAATTATATACCGCCGCCAATCAAACGCATGGTTTCCATTCTCATGCCTTACCCTCACATACCTCACCTAATTCTACGGTTCATGGTGAATTGCAAAGTGTTATGGATCATATTAGTAATGTGGGTGTAAGACAACAACATAACATTATGTCGGGCGGGGGAGTAACACATCCAGGAGATTTAACTTTAATAGGGAATTGTGGTGCCTCGGTAAGGAATATAGAAGATGGTAATACCAACAGACAGTTGACAGCTTTGGCGGCTCATCGTGGTCACCATAATCCAGCTGATAATGGGGGTAGTGTGTGGCGGCCATATTGA
Protein Sequence
MTSDILAERTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELRNSTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPRSKTRQQQQFHFAFGQRPFHFSTDPLSGFRMPPIGNCQSASNTHWGYGSATAYSPYLASSGLSSCTTPTSAQFNNPALGFSCSSNEQPNNQDFTGASNRDCVPMLPDSTASDLDQHLSNLVGSTTGQMSHHSLLGSTGQTAISSTVNGGAVPGSNSILVPRYHNSNNDYNVHSSQNGPRSLSDSSQAESPVQEDLLSTNTPNLGGTNGNTANNGGANSNSNGSANNSLVGTNQNFSGIVNQTQNPAAYGTTGTGVGVGGGHSGAAGAGCNGSLYPVLPASLLYSQLYTAANQTHGFHSHALPSHTSPNSTVHGELQSVMDHISNVGVRQQHNIMSGGGVTHPGDLTLIGNCGASVRNIEDGNTNRQLTALAAHRGHHNPADNGGSVWRPY