Basic Information

Insect: Coccinella septempunctata
Gene Symbol: -
Assembly: GCA_907165205.1
Location: OU015576.1:4558850-4561030[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.019 3.2 9.6 1.1 2 23 271 292 270 292 0.98

2 8 4.5e-06 0.00076 21.0 2.6 1 23 299 321 299 321 0.99

3 8 4.1e-08 6.9e-06 27.4 0.5 1 23 327 349 327 349 0.99

4 8 1.1e-06 0.00018 22.9 0.2 1 23 355 377 355 377 0.98

5 8 2.1e-06 0.00036 22.0 5.4 1 23 383 405 383 405 0.99

6 8 1e-05 0.0017 19.9 1.5 1 23 411 433 411 433 0.98

7 8 2.1e-05 0.0036 18.9 2.5 1 22 439 460 439 460 0.95

8 8 0.015 2.6 9.9 0.5 1 23 466 490 466 490 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.019	3.2	9.6	1.1	2	23	271	292	270	292	0.98
2	8	4.5e-06	0.00076	21.0	2.6	1	23	299	321	299	321	0.99
3	8	4.1e-08	6.9e-06	27.4	0.5	1	23	327	349	327	349	0.99
4	8	1.1e-06	0.00018	22.9	0.2	1	23	355	377	355	377	0.98
5	8	2.1e-06	0.00036	22.0	5.4	1	23	383	405	383	405	0.99
6	8	1e-05	0.0017	19.9	1.5	1	23	411	433	411	433	0.98
7	8	2.1e-05	0.0036	18.9	2.5	1	22	439	460	439	460	0.95
8	8	0.015	2.6	9.9	0.5	1	23	466	490	466	490	0.92

Sequence Information

Coding Sequence: ATGGAATATGACTTTGAAAAAATTTGTCGTGTTTGCTTGGTTAAAAGTGACGAGATGATGTCTCTTTTCAAAGTTAACGTTTCAAGAAAAATTATGGCTTGTGCTTCAGTACAGGTATGGCCGAATGATGAATTACCCGCACAGATCTGCAACAAATGCTGTGCAAAGTTACATGTAGCTTTCCAGTTCAAAAAACTCTGTGAAAAGTCTGATTCGAAATTGCGGACTTATATTGCTGAGAATGGGCGAATGAAATCAAACAAAAAGCAAATTCAATCAAGTGATTCGCGTCAGCATTCTGTTAATAATCAAGGAATGCTGAATAAGCAGTTGGAAGGATTAAACAAACACCAAGATGTGCATCAGGAGCAATTGCAGCACCATACGCTAGATACTATGCATGCCCAGAACAACTGCAGGTTTGTTGAATGTAGTGATATTGTTGATGTTTATGTTCAAGATTCATCATACGTTCAGAATGGTCAACCCATACAAGGATCTTTAGGTCCTATGAACAACTTCAACACAGCTCAACCCACAATTCAAGCTCCATTGCAAATCGGAAACTACAATGTATCCAATGTTGTTTATAGTAATTCCTATCCAATCACTTTACAGCCACCTCCTTTAATGCATAACCAGATGCTCACCTCAATTCCTATGCAACCAATACAACAAGAAACACCACCAAATATTCAACAAATTCCAGGGCAAGCAGCACCTTCAAAAAAAGAAACAACCACTGAAAATAATTCAATTGAAGCCAATTCAGATAAAATGAAAAATGAAAAAAACTCAGACAATCCTAACCAGTGTCCAGTCTGCTTAAAGATATTTCTGAATTCAACTAAGAAGAACAGGCATATGAAAATACACTCGAAAACAGATATGCCATATAAATGTTCAGTTTGTAGTAAAGAATTTACGCATGGCGGTAATTATAAAATTCATATGAGGATGCATAATAATGAGAGGCCATTCAAATGTACAATGTGTCCAAAAGGATTTGTGCAAGCCCAAGACTTGGAAAAGCATATGAGAACACATACAGGTGAAAGACCACACAAATGTCCTATGTGTTGGAAAGCTTTCTCTGCAGGATCAAATTTAATAGCACATATAAGAACCCACACTGGGGAACGTCCATATGTGTGCTGTGTTTGCTCAAAGGCTTTCTGCCAATCGAATGAATTAACAAAGCACATGAGGACACACACAGGTGAAAAATCTCATAGGTGTGATATATGCAACAAAGGTTTCAATGGGTCCAGCACACTAATTGTCCATAAAAGGTCACACACAGGTGAAAAACCCTTCATGTGCAAAGTTTGCAGCAAGTCATTCTCACAATCAAGTTGTCTCTCAGCACATTTGAAACGTTATGGGGAATCGAAATACCCTTGTGATTTGTGCAACGTGTCTTTCCACTCGGAAAAAGTGTTACAAGAACATGAGAAAACTGAAGAACATAATTCGAAACTTTTCAAGTGCCAATCCTACAGTAAACATGTAGTTTCTGCACAAAGTGGATTTGACAAACATGTTATAAGTGAACATATTGATACTTTGAGTATAACTGGTAGCTAA
Protein Sequence: MEYDFEKICRVCLVKSDEMMSLFKVNVSRKIMACASVQVWPNDELPAQICNKCCAKLHVAFQFKKLCEKSDSKLRTYIAENGRMKSNKKQIQSSDSRQHSVNNQGMLNKQLEGLNKHQDVHQEQLQHHTLDTMHAQNNCRFVECSDIVDVYVQDSSYVQNGQPIQGSLGPMNNFNTAQPTIQAPLQIGNYNVSNVVYSNSYPITLQPPPLMHNQMLTSIPMQPIQQETPPNIQQIPGQAAPSKKETTTENNSIEANSDKMKNEKNSDNPNQCPVCLKIFLNSTKKNRHMKIHSKTDMPYKCSVCSKEFTHGGNYKIHMRMHNNERPFKCTMCPKGFVQAQDLEKHMRTHTGERPHKCPMCWKAFSAGSNLIAHIRTHTGERPYVCCVCSKAFCQSNELTKHMRTHTGEKSHRCDICNKGFNGSSTLIVHKRSHTGEKPFMCKVCSKSFSQSSCLSAHLKRYGESKYPCDLCNVSFHSEKVLQEHEKTEEHNSKLFKCQSYSKHVVSAQSGFDKHVISEHIDTLSITGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130965;
90% Identity: iTF_00349840;
80% Identity: iTF_00349840;