Ccur035111.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905475355.1
- Location
- FR997797.1:2183486-2196592[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.077 2.8e+03 -1.7 0.1 65 91 80 107 49 111 0.74 2 3 2.3e-77 8.3e-73 246.3 20.9 1 297 127 412 127 415 0.89 3 3 0.7 2.5e+04 -4.9 10.1 125 165 439 479 420 489 0.44
Sequence Information
- Coding Sequence
- ATGGGACACCGGTCGGTACTGGCTACACCTGATAATAGCGACGAAGAGAGTGGCGAGGCCTTCACAGATGGCGATTTTGGTGATTCCGATGATGAAAATCTTGTACAACGTAGTGATGAAGCCAAAGTATCCCTCATTCCTGTTAATGAAACTTTAAACGAAATTGCAAAAACAAATGGAAACACTAATGGACACCAAGTTGACAGTGACTTTGATGATAATATTAATGACCAGCCTAAATTAAATGGACGCATGAATAGTGAAAATCAAACAAGTGACGTGGAAAATCAAAGCGTTTTAATATCAGATCTAAGAAGAGACTCACACGGCGAACAGAGTCCGTCAATAGTTGGCATTCTTGGAGACCAACAAAATCACGCAGAACAGCGGTTGGCGGCGAGGCGAGCGGCCAGGGCAGAGGCGCGCGAGATACGCATGCGGGAGCTTGAGAGACAGCAGCGTGAGCAGGAGGACCATGCGGACAAGGCGTACGACATGTACTCAGAGACAGTCGGGCGGCGGGGGAACCCCCGGCTGGCGGCCCTTAGCCCCGTCGGAGTGCTATCGCCGAGGAGAAGCTCTGAAGACTCGGATGACACCTTCAGCGTCAAAGAACTTAGGCACGAGTTGAAAGAAGTGGAGGAAAAATTCCGTAAAGCGATGATATTGAACGCGCAGCTTGACAACGACAAGGCGGCGCTAGGGTACCAACTAGAGCTGCTCAAAGACAGGATAGAGGAGCTACACGAAGAATATGTTCAGTTGCAGCGCGAACACAGGGAAAAGTGCTCATCTTTCGAGCGCTTAAAGCGCGAACACGAATGCGTGTCGCGGGAGCTCAGCGCAGCACGGGACGCTGTAAGGGCGAGGGACGCGGCCGCCCGTGCTGCTGGCTTCGCCTTCGTGGAGGCCGCGGCCCTGGAGCCCGGGGAAGGGGGGCCGGCGGGAGAGGCGCATGGGGCAGTTCCACCGCTGGCGCTCATCTCGCACACGGCCGAGAAACTGCTCAACGACGCTGGCGAGGGCACGCTGGACGTCCGGTTGCAAAATCTACTTAGCTCGAAGCAGGCGCTAGAATCCGAAGTACGCAAATTGAAATTACAACTAAACGAAGAACGGGCTGCGAGACAAAATGGTGTGGCTAACCACCACGACGACGAATATGAAAATGAACTGGAGACGGTCCGCAAGGCCGTGGCGGAGGCCAAGGCGCGCGCGGCGCGGGCCGAGGCGGAGGCGGCGCTGCAGGGCGCGCTCGTGGCCCGCCTGGAGGCGCAGGTGGCCCGCCTCAGGGCGCGCCAGGACCACCAGGACGACCACGAGGAGCAGCTCAAGCAGGAGCGGCGGCGTCTGCAGCGGGAGGCGCGGGAAGCCCTTAACAGGGTCGAAGAACTGGAGACCGAGAATAGCCATCTCACCAAGCGACTCGACAAACTGAAGAACGCCAAGTCAGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGHRSVLATPDNSDEESGEAFTDGDFGDSDDENLVQRSDEAKVSLIPVNETLNEIAKTNGNTNGHQVDSDFDDNINDQPKLNGRMNSENQTSDVENQSVLISDLRRDSHGEQSPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRGNPRLAALSPVGVLSPRRSSEDSDDTFSVKELRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYVQLQREHREKCSSFERLKREHECVSRELSAARDAVRARDAAARAAGFAFVEAAALEPGEGGPAGEAHGAVPPLALISHTAEKLLNDAGEGTLDVRLQNLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDDEYENELETVRKAVAEAKARAARAEAEAALQGALVARLEAQVARLRARQDHQDDHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -